Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
THBS1P07996 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
THBS1P07996 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC15.26■□□□□ 0.03
THBS1P07996 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
THBS1P07996 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
THBS1P07996 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
THBS1P07996 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC15.26■□□□□ 0.03
THBS1P07996 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
THBS1P07996 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
THBS1P07996 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
THBS1P07996 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC15.26■□□□□ 0.03
THBS1P07996 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC15.26■□□□□ 0.03
THBS1P07996 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC15.26■□□□□ 0.03
THBS1P07996 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC15.26■□□□□ 0.03
THBS1P07996 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
THBS1P07996 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
THBS1P07996 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
THBS1P07996 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
THBS1P07996 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
THBS1P07996 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
THBS1P07996 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC15.26■□□□□ 0.03
THBS1P07996 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
THBS1P07996 PMS2P4-201ENST00000412466 1052 ntBASIC15.26■□□□□ 0.03
THBS1P07996 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
THBS1P07996 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
THBS1P07996 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
THBS1P07996 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC15.26■□□□□ 0.03
THBS1P07996 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
THBS1P07996 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC15.26■□□□□ 0.03
THBS1P07996 AL031432.2-201ENST00000566714 459 ntBASIC15.26■□□□□ 0.03
THBS1P07996 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC15.26■□□□□ 0.03
THBS1P07996 AL928711.1-201ENST00000570165 459 ntBASIC15.26■□□□□ 0.03
THBS1P07996 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC15.26■□□□□ 0.03
THBS1P07996 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
THBS1P07996 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC15.26■□□□□ 0.03
THBS1P07996 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
THBS1P07996 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
THBS1P07996 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
THBS1P07996 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC15.26■□□□□ 0.03
THBS1P07996 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
THBS1P07996 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC15.26■□□□□ 0.03
THBS1P07996 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
THBS1P07996 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
THBS1P07996 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
THBS1P07996 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
THBS1P07996 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
THBS1P07996 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
THBS1P07996 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
THBS1P07996 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
THBS1P07996 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC15.26■□□□□ 0.03
THBS1P07996 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
THBS1P07996 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
THBS1P07996 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
THBS1P07996 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
THBS1P07996 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
THBS1P07996 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
THBS1P07996 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
THBS1P07996 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
THBS1P07996 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
THBS1P07996 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
THBS1P07996 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
THBS1P07996 CD99-202ENST00000381180 530 ntTSL 2 BASIC15.25■□□□□ 0.03
THBS1P07996 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
THBS1P07996 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC15.25■□□□□ 0.03
THBS1P07996 HMGA1P7-201ENST00000406908 502 ntBASIC15.25■□□□□ 0.03
THBS1P07996 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
THBS1P07996 VN2R19P-201ENST00000442399 1052 ntBASIC15.25■□□□□ 0.03
THBS1P07996 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC15.25■□□□□ 0.03
THBS1P07996 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
THBS1P07996 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC15.25■□□□□ 0.03
THBS1P07996 POLD4-207ENST00000531239 584 ntTSL 2 BASIC15.25■□□□□ 0.03
THBS1P07996 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
THBS1P07996 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC15.25■□□□□ 0.03
THBS1P07996 AL049840.3-201ENST00000602669 611 ntBASIC15.25■□□□□ 0.03
THBS1P07996 AL031055.1-201ENST00000606362 631 ntBASIC15.25■□□□□ 0.03
THBS1P07996 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC15.25■□□□□ 0.03
THBS1P07996 NFIC-211ENST00000641145 8399 ntBASIC15.25■□□□□ 0.03
THBS1P07996 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC15.25■□□□□ 0.03
THBS1P07996 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
THBS1P07996 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
THBS1P07996 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
THBS1P07996 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC15.25■□□□□ 0.03
THBS1P07996 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
THBS1P07996 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
THBS1P07996 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
THBS1P07996 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
THBS1P07996 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
THBS1P07996 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
THBS1P07996 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
THBS1P07996 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
THBS1P07996 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
THBS1P07996 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
THBS1P07996 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
THBS1P07996 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
THBS1P07996 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
THBS1P07996 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
THBS1P07996 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC15.24■□□□□ 0.03
THBS1P07996 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
THBS1P07996 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
THBS1P07996 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms