Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
TPM3P06753 SPDYE13P-201ENST00000445314 798 ntBASIC18.65■□□□□ 0.58
TPM3P06753 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC18.65■□□□□ 0.58
TPM3P06753 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC18.65■□□□□ 0.58
TPM3P06753 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TPM3P06753 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC18.65■□□□□ 0.58
TPM3P06753 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TPM3P06753 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC18.65■□□□□ 0.58
TPM3P06753 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC18.65■□□□□ 0.58
TPM3P06753 AC133561.5-201ENST00000635547 218 ntBASIC18.65■□□□□ 0.58
TPM3P06753 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC18.65■□□□□ 0.58
TPM3P06753 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
TPM3P06753 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC18.65■□□□□ 0.58
TPM3P06753 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TPM3P06753 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
TPM3P06753 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TPM3P06753 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TPM3P06753 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TPM3P06753 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TPM3P06753 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
TPM3P06753 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TPM3P06753 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TPM3P06753 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
TPM3P06753 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC18.65■□□□□ 0.58
TPM3P06753 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TPM3P06753 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TPM3P06753 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
TPM3P06753 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TPM3P06753 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC18.65■□□□□ 0.58
TPM3P06753 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
TPM3P06753 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
TPM3P06753 SLC9A7P1-201ENST00000554295 3311 ntBASIC18.64■□□□□ 0.58
TPM3P06753 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
TPM3P06753 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
TPM3P06753 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TPM3P06753 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC18.64■□□□□ 0.57
TPM3P06753 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TPM3P06753 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC18.64■□□□□ 0.57
TPM3P06753 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
TPM3P06753 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
TPM3P06753 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TPM3P06753 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TPM3P06753 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
TPM3P06753 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TPM3P06753 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TPM3P06753 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TPM3P06753 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TPM3P06753 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
TPM3P06753 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
TPM3P06753 COX5A-202ENST00000562233 441 ntTSL 3 BASIC18.64■□□□□ 0.57
TPM3P06753 COX5A-204ENST00000567270 579 ntTSL 3 BASIC18.64■□□□□ 0.57
TPM3P06753 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC18.64■□□□□ 0.57
TPM3P06753 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TPM3P06753 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TPM3P06753 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TPM3P06753 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
TPM3P06753 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC18.64■□□□□ 0.57
TPM3P06753 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC18.64■□□□□ 0.57
TPM3P06753 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
TPM3P06753 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
TPM3P06753 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC18.64■□□□□ 0.57
TPM3P06753 GOLGA8DP-202ENST00000341390 2184 ntBASIC18.64■□□□□ 0.57
TPM3P06753 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TPM3P06753 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TPM3P06753 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC18.63■□□□□ 0.57
TPM3P06753 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TPM3P06753 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TPM3P06753 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC18.63■□□□□ 0.57
TPM3P06753 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC18.63■□□□□ 0.57
TPM3P06753 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC18.63■□□□□ 0.57
TPM3P06753 HARS-204ENST00000438307 1789 ntTSL 2 BASIC18.63■□□□□ 0.57
TPM3P06753 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TPM3P06753 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TPM3P06753 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TPM3P06753 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC18.63■□□□□ 0.57
TPM3P06753 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TPM3P06753 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC18.63■□□□□ 0.57
TPM3P06753 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
TPM3P06753 AC023157.3-201ENST00000619086 2088 ntBASIC18.63■□□□□ 0.57
TPM3P06753 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TPM3P06753 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TPM3P06753 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC18.63■□□□□ 0.57
TPM3P06753 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
TPM3P06753 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC18.63■□□□□ 0.57
TPM3P06753 AC011498.5-201ENST00000592027 486 ntBASIC18.63■□□□□ 0.57
TPM3P06753 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC18.63■□□□□ 0.57
TPM3P06753 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TPM3P06753 C1R-202ENST00000536053 2347 ntTSL 2 BASIC18.63■□□□□ 0.57
TPM3P06753 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC18.63■□□□□ 0.57
TPM3P06753 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC18.63■□□□□ 0.57
TPM3P06753 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
TPM3P06753 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TPM3P06753 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC18.63■□□□□ 0.57
TPM3P06753 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TPM3P06753 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TPM3P06753 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TPM3P06753 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TPM3P06753 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TPM3P06753 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC18.62■□□□□ 0.57
TPM3P06753 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms