Protein–RNA interactions for Protein: P05166

PCCB, Propionyl-CoA carboxylase beta chain, mitochondrial, humanhuman

Predictions only

Length 539 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCCBP05166 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PCCBP05166 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
PCCBP05166 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCCBP05166 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
PCCBP05166 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCCBP05166 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
PCCBP05166 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PCCBP05166 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCCBP05166 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCCBP05166 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCCBP05166 AC008677.1-201ENST00000519230 1561 ntBASIC16.38■□□□□ 0.21
PCCBP05166 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
PCCBP05166 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCCBP05166 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCCBP05166 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.37■□□□□ 0.21
PCCBP05166 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCCBP05166 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCCBP05166 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
PCCBP05166 UBALD1-205ENST00000590891 2641 ntBASIC16.37■□□□□ 0.21
PCCBP05166 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCCBP05166 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCCBP05166 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCCBP05166 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCCBP05166 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PCCBP05166 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCCBP05166 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCCBP05166 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
PCCBP05166 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCCBP05166 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCCBP05166 GPAA1P2-202ENST00000606848 1787 ntBASIC16.37■□□□□ 0.21
PCCBP05166 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC16.37■□□□□ 0.21
PCCBP05166 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PCCBP05166 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCCBP05166 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCCBP05166 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PCCBP05166 PP14571-201ENST00000404327 934 ntTSL 2 BASIC16.37■□□□□ 0.21
PCCBP05166 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC16.37■□□□□ 0.21
PCCBP05166 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC16.37■□□□□ 0.21
PCCBP05166 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC16.37■□□□□ 0.21
PCCBP05166 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC16.37■□□□□ 0.21
PCCBP05166 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC16.37■□□□□ 0.21
PCCBP05166 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC16.37■□□□□ 0.21
PCCBP05166 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC16.37■□□□□ 0.21
PCCBP05166 AC073389.1-201ENST00000595595 795 ntBASIC16.37■□□□□ 0.21
PCCBP05166 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PCCBP05166 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCCBP05166 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCCBP05166 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
PCCBP05166 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCCBP05166 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
PCCBP05166 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
PCCBP05166 TUBB3P1-201ENST00000405796 1332 ntBASIC16.37■□□□□ 0.21
PCCBP05166 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PCCBP05166 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16.37■□□□□ 0.21
PCCBP05166 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PCCBP05166 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCCBP05166 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCCBP05166 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCCBP05166 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCCBP05166 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PCCBP05166 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCCBP05166 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCCBP05166 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.36■□□□□ 0.21
PCCBP05166 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCCBP05166 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCCBP05166 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
PCCBP05166 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC16.36■□□□□ 0.21
PCCBP05166 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCCBP05166 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCCBP05166 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.36■□□□□ 0.21
PCCBP05166 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCCBP05166 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PCCBP05166 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCCBP05166 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
PCCBP05166 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCCBP05166 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
PCCBP05166 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PCCBP05166 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PCCBP05166 AC022211.2-201ENST00000585075 2527 ntBASIC16.36■□□□□ 0.21
PCCBP05166 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCCBP05166 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PCCBP05166 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCCBP05166 MIR770-201ENST00000390219 98 ntBASIC16.36■□□□□ 0.21
PCCBP05166 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PCCBP05166 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC16.36■□□□□ 0.21
PCCBP05166 SPDYE7P-202ENST00000420373 878 ntBASIC16.36■□□□□ 0.21
PCCBP05166 HLA-J-202ENST00000469281 1241 ntBASIC16.36■□□□□ 0.21
PCCBP05166 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC16.36■□□□□ 0.21
PCCBP05166 AL512356.2-201ENST00000546955 174 ntBASIC16.36■□□□□ 0.21
PCCBP05166 DUX4L27-201ENST00000554796 1261 ntBASIC16.36■□□□□ 0.21
PCCBP05166 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC16.36■□□□□ 0.21
PCCBP05166 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC16.36■□□□□ 0.21
PCCBP05166 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC16.36■□□□□ 0.21
PCCBP05166 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
PCCBP05166 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PCCBP05166 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
PCCBP05166 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PCCBP05166 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.36■□□□□ 0.21
PCCBP05166 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC16.36■□□□□ 0.21
PCCBP05166 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms