Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 AC006538.1-201ENST00000567905 1585 ntBASIC15.12■□□□□ 0.01
P04436 AC012313.1-201ENST00000593393 3059 ntBASIC15.12■□□□□ 0.01
P04436 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC15.12■□□□□ 0.01
P04436 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
P04436 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
P04436 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
P04436 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
P04436 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
P04436 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
P04436 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
P04436 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
P04436 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
P04436 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
P04436 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
P04436 CNN2P2-201ENST00000443536 909 ntBASIC15.12■□□□□ 0.01
P04436 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC15.12■□□□□ 0.01
P04436 CNN2P3-201ENST00000450201 906 ntBASIC15.12■□□□□ 0.01
P04436 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC15.12■□□□□ 0.01
P04436 AL138918.1-201ENST00000568306 659 ntBASIC15.12■□□□□ 0.01
P04436 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
P04436 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC15.12■□□□□ 0.01
P04436 AL136317.3-201ENST00000618497 906 ntBASIC15.12■□□□□ 0.01
P04436 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC15.12■□□□□ 0.01
P04436 ORC5-208ENST00000626700 344 ntTSL 3 BASIC15.12■□□□□ 0.01
P04436 AC084121.4-201ENST00000641598 221 ntBASIC15.12■□□□□ 0.01
P04436 AF228730.8-201ENST00000642140 221 ntBASIC15.12■□□□□ 0.01
P04436 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
P04436 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
P04436 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
P04436 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
P04436 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
P04436 AL603756.1-201ENST00000606511 2163 ntBASIC15.12■□□□□ 0.01
P04436 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
P04436 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC15.12■□□□□ 0.01
P04436 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
P04436 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
P04436 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
P04436 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC15.12■□□□□ 0.01
P04436 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
P04436 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
P04436 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
P04436 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
P04436 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
P04436 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC15.11■□□□□ 0.01
P04436 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
P04436 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
P04436 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
P04436 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC15.11■□□□□ 0.01
P04436 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC15.11■□□□□ 0.01
P04436 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.11■□□□□ 0.01
P04436 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
P04436 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC15.11■□□□□ 0.01
P04436 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC15.11■□□□□ 0.01
P04436 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
P04436 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
P04436 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
P04436 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
P04436 MIR346-201ENST00000362234 95 ntBASIC15.11■□□□□ 0.01
P04436 PP14571-201ENST00000404327 934 ntTSL 2 BASIC15.11■□□□□ 0.01
P04436 SPDYE7P-202ENST00000420373 878 ntBASIC15.11■□□□□ 0.01
P04436 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC15.11■□□□□ 0.01
P04436 AC067863.1-201ENST00000494933 530 ntBASIC15.11■□□□□ 0.01
P04436 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC15.11■□□□□ 0.01
P04436 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
P04436 AP001059.3-201ENST00000619053 235 ntBASIC15.11■□□□□ 0.01
P04436 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
P04436 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC15.11■□□□□ 0.01
P04436 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
P04436 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
P04436 AL512652.2-201ENST00000625156 1716 ntBASIC15.11■□□□□ 0.01
P04436 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
P04436 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
P04436 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
P04436 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
P04436 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
P04436 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
P04436 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
P04436 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC15.1■□□□□ 0.01
P04436 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
P04436 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC15.1■□□□□ 0.01
P04436 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC15.1■□□□□ 0.01
P04436 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC15.1■□□□□ 0.01
P04436 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
P04436 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
P04436 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
P04436 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
P04436 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
P04436 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
P04436 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC15.1■□□□□ 0.01
P04436 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
P04436 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC15.1■□□□□ 0.01
P04436 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC15.1■□□□□ 0.01
P04436 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC15.1■□□□□ 0.01
P04436 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
P04436 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC15.1■□□□□ 0.01
P04436 CYMP-203ENST00000474680 1263 ntBASIC15.1■□□□□ 0.01
P04436 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC15.1■□□□□ 0.01
P04436 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC15.1■□□□□ 0.01
P04436 ALG1L8P-201ENST00000533887 760 ntBASIC15.1■□□□□ 0.01
P04436 VPS29-207ENST00000549970 818 ntTSL 3 BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms