Protein–RNA interactions for Protein: P02656

APOC3, Apolipoprotein C-III, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC3P02656 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
APOC3P02656 HLA-J-202ENST00000469281 1241 ntBASIC13.32□□□□□ -0.28
APOC3P02656 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC13.32□□□□□ -0.28
APOC3P02656 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC13.32□□□□□ -0.28
APOC3P02656 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
APOC3P02656 C1QL1P1-201ENST00000568105 661 ntBASIC13.32□□□□□ -0.28
APOC3P02656 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
APOC3P02656 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
APOC3P02656 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
APOC3P02656 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
APOC3P02656 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
APOC3P02656 AC027612.1-201ENST00000445234 2395 ntBASIC13.32□□□□□ -0.28
APOC3P02656 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
APOC3P02656 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
APOC3P02656 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
APOC3P02656 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
APOC3P02656 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
APOC3P02656 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
APOC3P02656 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
APOC3P02656 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC13.32□□□□□ -0.28
APOC3P02656 NIN-202ENST00000324330 4364 ntTSL 5 BASIC13.32□□□□□ -0.28
APOC3P02656 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
APOC3P02656 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
APOC3P02656 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
APOC3P02656 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
APOC3P02656 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
APOC3P02656 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
APOC3P02656 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
APOC3P02656 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
APOC3P02656 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
APOC3P02656 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
APOC3P02656 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC13.31□□□□□ -0.28
APOC3P02656 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
APOC3P02656 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
APOC3P02656 DMBT1P1-203ENST00000636837 4628 ntBASIC13.31□□□□□ -0.28
APOC3P02656 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
APOC3P02656 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
APOC3P02656 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
APOC3P02656 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
APOC3P02656 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
APOC3P02656 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
APOC3P02656 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
APOC3P02656 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
APOC3P02656 AC091951.1-201ENST00000512854 2465 ntBASIC13.31□□□□□ -0.28
APOC3P02656 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC13.31□□□□□ -0.28
APOC3P02656 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC13.31□□□□□ -0.28
APOC3P02656 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
APOC3P02656 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
APOC3P02656 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC13.31□□□□□ -0.28
APOC3P02656 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
APOC3P02656 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC13.31□□□□□ -0.28
APOC3P02656 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
APOC3P02656 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
APOC3P02656 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
APOC3P02656 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
APOC3P02656 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
APOC3P02656 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
APOC3P02656 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC13.31□□□□□ -0.28
APOC3P02656 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC13.31□□□□□ -0.28
APOC3P02656 OR2A1-AS1-204ENST00000470435 602 ntBASIC13.31□□□□□ -0.28
APOC3P02656 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC13.31□□□□□ -0.28
APOC3P02656 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC13.31□□□□□ -0.28
APOC3P02656 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC13.31□□□□□ -0.28
APOC3P02656 AC106739.1-201ENST00000617035 715 ntBASIC13.31□□□□□ -0.28
APOC3P02656 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
APOC3P02656 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
APOC3P02656 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
APOC3P02656 HAL-202ENST00000538703 2637 ntTSL 2 BASIC13.31□□□□□ -0.28
APOC3P02656 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
APOC3P02656 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
APOC3P02656 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC13.31□□□□□ -0.28
APOC3P02656 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
APOC3P02656 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
APOC3P02656 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
APOC3P02656 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
APOC3P02656 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
APOC3P02656 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC13.31□□□□□ -0.28
APOC3P02656 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
APOC3P02656 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
APOC3P02656 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
APOC3P02656 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
APOC3P02656 API5-202ENST00000420461 2009 ntTSL 2 BASIC13.3□□□□□ -0.28
APOC3P02656 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
APOC3P02656 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
APOC3P02656 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
APOC3P02656 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
APOC3P02656 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
APOC3P02656 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC13.3□□□□□ -0.28
APOC3P02656 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
APOC3P02656 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC13.3□□□□□ -0.28
APOC3P02656 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
APOC3P02656 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC13.3□□□□□ -0.28
APOC3P02656 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
APOC3P02656 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
APOC3P02656 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
APOC3P02656 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
APOC3P02656 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
APOC3P02656 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
APOC3P02656 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC13.3□□□□□ -0.28
APOC3P02656 EGFEM1P-202ENST00000431685 1563 ntBASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms