Protein–RNA interactions for Protein: O75935

DCTN3, Dynactin subunit 3, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCTN3O75935 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
DCTN3O75935 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
DCTN3O75935 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
DCTN3O75935 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
DCTN3O75935 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
DCTN3O75935 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
DCTN3O75935 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
DCTN3O75935 MDFI-202ENST00000373050 809 ntTSL 2 BASIC16.31■□□□□ 0.2
DCTN3O75935 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
DCTN3O75935 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
DCTN3O75935 ACTG1P4-201ENST00000425123 1122 ntBASIC16.31■□□□□ 0.2
DCTN3O75935 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
DCTN3O75935 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
DCTN3O75935 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
DCTN3O75935 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC16.31■□□□□ 0.2
DCTN3O75935 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
DCTN3O75935 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16.31■□□□□ 0.2
DCTN3O75935 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
DCTN3O75935 AL109954.1-202ENST00000564051 2148 ntBASIC16.31■□□□□ 0.2
DCTN3O75935 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
DCTN3O75935 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
DCTN3O75935 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
DCTN3O75935 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC16.31■□□□□ 0.2
DCTN3O75935 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
DCTN3O75935 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
DCTN3O75935 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
DCTN3O75935 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
DCTN3O75935 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
DCTN3O75935 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.31■□□□□ 0.2
DCTN3O75935 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
DCTN3O75935 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC16.31■□□□□ 0.2
DCTN3O75935 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
DCTN3O75935 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
DCTN3O75935 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.31■□□□□ 0.2
DCTN3O75935 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
DCTN3O75935 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
DCTN3O75935 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
DCTN3O75935 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
DCTN3O75935 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
DCTN3O75935 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
DCTN3O75935 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
DCTN3O75935 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
DCTN3O75935 AC007326.2-201ENST00000624224 7579 ntBASIC16.3■□□□□ 0.2
DCTN3O75935 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
DCTN3O75935 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
DCTN3O75935 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC16.3■□□□□ 0.2
DCTN3O75935 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC16.3■□□□□ 0.2
DCTN3O75935 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
DCTN3O75935 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.3■□□□□ 0.2
DCTN3O75935 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
DCTN3O75935 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC16.3■□□□□ 0.2
DCTN3O75935 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC16.3■□□□□ 0.2
DCTN3O75935 MIR662-201ENST00000384847 95 ntBASIC16.3■□□□□ 0.2
DCTN3O75935 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC16.3■□□□□ 0.2
DCTN3O75935 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC16.3■□□□□ 0.2
DCTN3O75935 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
DCTN3O75935 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC16.3■□□□□ 0.2
DCTN3O75935 MIR4785-201ENST00000585005 73 ntBASIC16.3■□□□□ 0.2
DCTN3O75935 Z99916.2-201ENST00000604037 246 ntBASIC16.3■□□□□ 0.2
DCTN3O75935 AC141257.4-201ENST00000634557 245 ntBASIC16.3■□□□□ 0.2
DCTN3O75935 AC136944.6-201ENST00000634818 245 ntBASIC16.3■□□□□ 0.2
DCTN3O75935 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
DCTN3O75935 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
DCTN3O75935 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
DCTN3O75935 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC16.3■□□□□ 0.2
DCTN3O75935 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC16.3■□□□□ 0.2
DCTN3O75935 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
DCTN3O75935 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
DCTN3O75935 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
DCTN3O75935 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
DCTN3O75935 AL512652.2-201ENST00000625156 1716 ntBASIC16.3■□□□□ 0.2
DCTN3O75935 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC16.3■□□□□ 0.2
DCTN3O75935 HNRNPRP1-201ENST00000453465 1695 ntBASIC16.3■□□□□ 0.2
DCTN3O75935 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.3■□□□□ 0.2
DCTN3O75935 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC16.3■□□□□ 0.2
DCTN3O75935 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
DCTN3O75935 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
DCTN3O75935 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DCTN3O75935 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DCTN3O75935 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DCTN3O75935 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
DCTN3O75935 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
DCTN3O75935 AC020658.6-201ENST00000623564 1870 ntBASIC16.29■□□□□ 0.2
DCTN3O75935 AC136621.1-201ENST00000624017 2304 ntBASIC16.29■□□□□ 0.2
DCTN3O75935 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC16.29■□□□□ 0.2
DCTN3O75935 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
DCTN3O75935 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC16.29■□□□□ 0.2
DCTN3O75935 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
DCTN3O75935 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC16.29■□□□□ 0.2
DCTN3O75935 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
DCTN3O75935 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
DCTN3O75935 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DCTN3O75935 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.29■□□□□ 0.2
DCTN3O75935 LINC01144-201ENST00000626198 1710 ntBASIC16.29■□□□□ 0.2
DCTN3O75935 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
DCTN3O75935 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC16.29■□□□□ 0.2
DCTN3O75935 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DCTN3O75935 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
DCTN3O75935 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
DCTN3O75935 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms