Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LRCH4O75427 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LRCH4O75427 NME4-212ENST00000621774 904 ntTSL 3 BASIC17.23■□□□□ 0.35
LRCH4O75427 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LRCH4O75427 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC17.23■□□□□ 0.35
LRCH4O75427 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC17.23■□□□□ 0.35
LRCH4O75427 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC17.23■□□□□ 0.35
LRCH4O75427 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
LRCH4O75427 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LRCH4O75427 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LRCH4O75427 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LRCH4O75427 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LRCH4O75427 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC17.23■□□□□ 0.35
LRCH4O75427 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LRCH4O75427 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17.22■□□□□ 0.35
LRCH4O75427 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
LRCH4O75427 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRCH4O75427 AC092919.2-201ENST00000623631 1645 ntBASIC17.22■□□□□ 0.35
LRCH4O75427 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC17.22■□□□□ 0.35
LRCH4O75427 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRCH4O75427 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC17.22■□□□□ 0.35
LRCH4O75427 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC17.22■□□□□ 0.35
LRCH4O75427 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LRCH4O75427 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
LRCH4O75427 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LRCH4O75427 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRCH4O75427 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRCH4O75427 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC17.22■□□□□ 0.35
LRCH4O75427 TEX30-205ENST00000376029 959 ntTSL 2 BASIC17.22■□□□□ 0.35
LRCH4O75427 AC092474.2-201ENST00000424288 719 ntBASIC17.22■□□□□ 0.35
LRCH4O75427 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC17.22■□□□□ 0.35
LRCH4O75427 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC17.22■□□□□ 0.35
LRCH4O75427 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC17.22■□□□□ 0.35
LRCH4O75427 NMU-203ENST00000507338 658 ntTSL 3 BASIC17.22■□□□□ 0.35
LRCH4O75427 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
LRCH4O75427 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC17.22■□□□□ 0.35
LRCH4O75427 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
LRCH4O75427 PIN1-206ENST00000587625 878 ntTSL 2 BASIC17.22■□□□□ 0.35
LRCH4O75427 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC17.22■□□□□ 0.35
LRCH4O75427 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC17.22■□□□□ 0.35
LRCH4O75427 AC140113.2-201ENST00000604370 208 ntBASIC17.22■□□□□ 0.35
LRCH4O75427 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.22■□□□□ 0.35
LRCH4O75427 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRCH4O75427 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
LRCH4O75427 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LRCH4O75427 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC17.22■□□□□ 0.35
LRCH4O75427 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.22■□□□□ 0.35
LRCH4O75427 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
LRCH4O75427 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRCH4O75427 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRCH4O75427 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
LRCH4O75427 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRCH4O75427 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
LRCH4O75427 AC005622.1-201ENST00000636801 1703 ntBASIC17.21■□□□□ 0.35
LRCH4O75427 SP100-205ENST00000409824 1802 ntTSL 5 BASIC17.21■□□□□ 0.35
LRCH4O75427 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LRCH4O75427 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRCH4O75427 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRCH4O75427 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRCH4O75427 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC17.21■□□□□ 0.35
LRCH4O75427 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LRCH4O75427 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC17.21■□□□□ 0.35
LRCH4O75427 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC17.21■□□□□ 0.35
LRCH4O75427 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.21■□□□□ 0.35
LRCH4O75427 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRCH4O75427 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRCH4O75427 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC17.21■□□□□ 0.35
LRCH4O75427 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC17.21■□□□□ 0.35
LRCH4O75427 VMO1-203ENST00000416307 712 ntTSL 2 BASIC17.21■□□□□ 0.35
LRCH4O75427 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC17.21■□□□□ 0.35
LRCH4O75427 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LRCH4O75427 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRCH4O75427 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC17.21■□□□□ 0.35
LRCH4O75427 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC17.21■□□□□ 0.35
LRCH4O75427 PDPK2P-202ENST00000562415 1191 ntBASIC17.21■□□□□ 0.35
LRCH4O75427 AL513190.1-201ENST00000621254 727 ntBASIC17.21■□□□□ 0.35
LRCH4O75427 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRCH4O75427 AC008741.2-201ENST00000612792 3115 ntBASIC17.21■□□□□ 0.35
LRCH4O75427 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
LRCH4O75427 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRCH4O75427 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.21■□□□□ 0.35
LRCH4O75427 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LRCH4O75427 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRCH4O75427 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC17.21■□□□□ 0.35
LRCH4O75427 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRCH4O75427 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.34
LRCH4O75427 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.21■□□□□ 0.34
LRCH4O75427 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.34
LRCH4O75427 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRCH4O75427 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LRCH4O75427 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
LRCH4O75427 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRCH4O75427 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
LRCH4O75427 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
LRCH4O75427 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LRCH4O75427 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRCH4O75427 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRCH4O75427 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRCH4O75427 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
LRCH4O75427 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms