Protein–RNA interactions for Protein: O75365

PTP4A3, Protein tyrosine phosphatase type IVA 3, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3O75365 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC14.95□□□□□ -0.02
PTP4A3O75365 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC14.95□□□□□ -0.02
PTP4A3O75365 AC105339.3-201ENST00000560043 636 ntBASIC14.95□□□□□ -0.02
PTP4A3O75365 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
PTP4A3O75365 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC14.95□□□□□ -0.02
PTP4A3O75365 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
PTP4A3O75365 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC14.95□□□□□ -0.02
PTP4A3O75365 IFNL4P1-201ENST00000607083 540 ntBASIC14.95□□□□□ -0.02
PTP4A3O75365 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC14.95□□□□□ -0.02
PTP4A3O75365 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PTP4A3O75365 AC012313.10-201ENST00000623509 926 ntBASIC14.95□□□□□ -0.02
PTP4A3O75365 TP73-AS1-207ENST00000624167 988 ntBASIC14.95□□□□□ -0.02
PTP4A3O75365 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PTP4A3O75365 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PTP4A3O75365 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PTP4A3O75365 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
PTP4A3O75365 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PTP4A3O75365 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PTP4A3O75365 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC14.95□□□□□ -0.02
PTP4A3O75365 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
PTP4A3O75365 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC14.95□□□□□ -0.02
PTP4A3O75365 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PTP4A3O75365 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
PTP4A3O75365 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC14.95□□□□□ -0.02
PTP4A3O75365 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
PTP4A3O75365 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC14.95□□□□□ -0.02
PTP4A3O75365 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
PTP4A3O75365 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC14.95□□□□□ -0.02
PTP4A3O75365 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC14.95□□□□□ -0.02
PTP4A3O75365 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
PTP4A3O75365 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PTP4A3O75365 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
PTP4A3O75365 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PTP4A3O75365 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
PTP4A3O75365 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC14.94□□□□□ -0.02
PTP4A3O75365 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC14.94□□□□□ -0.02
PTP4A3O75365 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PTP4A3O75365 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
PTP4A3O75365 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
PTP4A3O75365 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
PTP4A3O75365 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PTP4A3O75365 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC14.94□□□□□ -0.02
PTP4A3O75365 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC14.94□□□□□ -0.02
PTP4A3O75365 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC14.94□□□□□ -0.02
PTP4A3O75365 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PTP4A3O75365 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PTP4A3O75365 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PTP4A3O75365 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PTP4A3O75365 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC14.94□□□□□ -0.02
PTP4A3O75365 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PTP4A3O75365 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PTP4A3O75365 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PTP4A3O75365 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC14.94□□□□□ -0.02
PTP4A3O75365 STARD13-205ENST00000439831 945 ntTSL 2 BASIC14.94□□□□□ -0.02
PTP4A3O75365 AC073648.2-201ENST00000510116 352 ntBASIC14.94□□□□□ -0.02
PTP4A3O75365 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC14.94□□□□□ -0.02
PTP4A3O75365 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
PTP4A3O75365 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC14.94□□□□□ -0.02
PTP4A3O75365 AL356488.2-201ENST00000602755 427 ntBASIC14.94□□□□□ -0.02
PTP4A3O75365 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
PTP4A3O75365 PGM5P2-202ENST00000637225 1043 ntBASIC14.94□□□□□ -0.02
PTP4A3O75365 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC14.94□□□□□ -0.02
PTP4A3O75365 LINC02228-204ENST00000642115 2962 ntBASIC14.94□□□□□ -0.02
PTP4A3O75365 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PTP4A3O75365 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
PTP4A3O75365 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC14.94□□□□□ -0.02
PTP4A3O75365 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PTP4A3O75365 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
PTP4A3O75365 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PTP4A3O75365 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PTP4A3O75365 SUPT20HL2-201ENST00000486479 2409 ntBASIC14.94□□□□□ -0.02
PTP4A3O75365 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PTP4A3O75365 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC14.94□□□□□ -0.02
PTP4A3O75365 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
PTP4A3O75365 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PTP4A3O75365 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
PTP4A3O75365 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PTP4A3O75365 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PTP4A3O75365 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PTP4A3O75365 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PTP4A3O75365 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC14.93□□□□□ -0.02
PTP4A3O75365 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PTP4A3O75365 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
PTP4A3O75365 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
PTP4A3O75365 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PTP4A3O75365 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PTP4A3O75365 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PTP4A3O75365 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC14.93□□□□□ -0.02
PTP4A3O75365 AC012569.1-201ENST00000591191 1524 ntBASIC14.93□□□□□ -0.02
PTP4A3O75365 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
PTP4A3O75365 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC14.93□□□□□ -0.02
PTP4A3O75365 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC14.93□□□□□ -0.02
PTP4A3O75365 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PTP4A3O75365 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PTP4A3O75365 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PTP4A3O75365 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
PTP4A3O75365 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PTP4A3O75365 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC14.93□□□□□ -0.02
PTP4A3O75365 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC14.93□□□□□ -0.02
PTP4A3O75365 FAM185BP-201ENST00000443595 716 ntBASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms