Protein–RNA interactions for Protein: O15344

MID1, E3 ubiquitin-protein ligase Midline-1, humanhuman

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MID1O15344 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
MID1O15344 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.55■□□□□ 0.24
MID1O15344 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC16.55■□□□□ 0.24
MID1O15344 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
MID1O15344 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
MID1O15344 GOLGA2P9-201ENST00000596977 1937 ntBASIC16.55■□□□□ 0.24
MID1O15344 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
MID1O15344 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
MID1O15344 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
MID1O15344 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
MID1O15344 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
MID1O15344 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
MID1O15344 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC16.54■□□□□ 0.24
MID1O15344 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
MID1O15344 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MID1O15344 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MID1O15344 FAM220BP-201ENST00000377689 816 ntBASIC16.54■□□□□ 0.24
MID1O15344 MIR661-201ENST00000384842 89 ntBASIC16.54■□□□□ 0.24
MID1O15344 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC16.54■□□□□ 0.24
MID1O15344 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC16.54■□□□□ 0.24
MID1O15344 COX20P2-201ENST00000452636 358 ntBASIC16.54■□□□□ 0.24
MID1O15344 AC098859.1-201ENST00000502915 1238 ntBASIC16.54■□□□□ 0.24
MID1O15344 RNA5SP410-201ENST00000516285 106 ntBASIC16.54■□□□□ 0.24
MID1O15344 SPDYE12P-201ENST00000618416 771 ntBASIC16.54■□□□□ 0.24
MID1O15344 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
MID1O15344 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MID1O15344 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
MID1O15344 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MID1O15344 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
MID1O15344 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
MID1O15344 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MID1O15344 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC16.54■□□□□ 0.24
MID1O15344 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MID1O15344 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
MID1O15344 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
MID1O15344 FER1L4-210ENST00000615531 5998 ntBASIC16.53■□□□□ 0.24
MID1O15344 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.53■□□□□ 0.24
MID1O15344 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.53■□□□□ 0.24
MID1O15344 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
MID1O15344 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
MID1O15344 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
MID1O15344 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MID1O15344 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
MID1O15344 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MID1O15344 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC16.53■□□□□ 0.24
MID1O15344 RAC2-204ENST00000406508 893 ntTSL 5 BASIC16.53■□□□□ 0.24
MID1O15344 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC16.53■□□□□ 0.24
MID1O15344 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC16.53■□□□□ 0.24
MID1O15344 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC16.53■□□□□ 0.24
MID1O15344 AC241585.1-201ENST00000433527 519 ntBASIC16.53■□□□□ 0.24
MID1O15344 AC002472.2-201ENST00000442739 958 ntBASIC16.53■□□□□ 0.24
MID1O15344 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MID1O15344 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC16.53■□□□□ 0.24
MID1O15344 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
MID1O15344 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC16.53■□□□□ 0.24
MID1O15344 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC16.53■□□□□ 0.24
MID1O15344 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC16.53■□□□□ 0.24
MID1O15344 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC16.53■□□□□ 0.24
MID1O15344 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC16.53■□□□□ 0.24
MID1O15344 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC16.53■□□□□ 0.24
MID1O15344 RN7SL204P-201ENST00000582831 262 ntBASIC16.53■□□□□ 0.24
MID1O15344 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC16.53■□□□□ 0.24
MID1O15344 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
MID1O15344 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC16.53■□□□□ 0.24
MID1O15344 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MID1O15344 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MID1O15344 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
MID1O15344 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
MID1O15344 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
MID1O15344 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.53■□□□□ 0.24
MID1O15344 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
MID1O15344 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MID1O15344 AC100757.3-201ENST00000622361 1406 ntBASIC16.53■□□□□ 0.24
MID1O15344 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MID1O15344 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
MID1O15344 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MID1O15344 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
MID1O15344 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MID1O15344 AL603756.1-201ENST00000606511 2163 ntBASIC16.53■□□□□ 0.24
MID1O15344 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
MID1O15344 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
MID1O15344 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.52■□□□□ 0.24
MID1O15344 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
MID1O15344 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
MID1O15344 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
MID1O15344 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
MID1O15344 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
MID1O15344 AL353705.2-201ENST00000428243 662 ntBASIC16.52■□□□□ 0.24
MID1O15344 OARD1-208ENST00000469104 704 ntTSL 2 BASIC16.52■□□□□ 0.24
MID1O15344 SATB1-217ENST00000493952 626 ntTSL 3 BASIC16.52■□□□□ 0.24
MID1O15344 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC16.52■□□□□ 0.24
MID1O15344 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
MID1O15344 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
MID1O15344 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC16.52■□□□□ 0.24
MID1O15344 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC16.52■□□□□ 0.24
MID1O15344 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC16.52■□□□□ 0.24
MID1O15344 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC16.52■□□□□ 0.24
MID1O15344 FHL2-212ENST00000607522 759 ntTSL 2 BASIC16.52■□□□□ 0.24
MID1O15344 AL138828.2-201ENST00000615812 383 ntBASIC16.52■□□□□ 0.24
MID1O15344 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms