Protein–RNA interactions for Protein: O15041

SEMA3E, Semaphorin-3E, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3EO15041 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC19.81■□□□□ 0.76
SEMA3EO15041 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SEMA3EO15041 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SEMA3EO15041 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SEMA3EO15041 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
SEMA3EO15041 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
SEMA3EO15041 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SEMA3EO15041 COX20P2-201ENST00000452636 358 ntBASIC19.81■□□□□ 0.76
SEMA3EO15041 AC009477.1-201ENST00000452936 217 ntBASIC19.81■□□□□ 0.76
SEMA3EO15041 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
SEMA3EO15041 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC19.81■□□□□ 0.76
SEMA3EO15041 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SEMA3EO15041 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC19.81■□□□□ 0.76
SEMA3EO15041 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SEMA3EO15041 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SEMA3EO15041 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SEMA3EO15041 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SEMA3EO15041 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SEMA3EO15041 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SEMA3EO15041 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SEMA3EO15041 FZD10-202ENST00000539839 3282 ntBASIC19.8■□□□□ 0.76
SEMA3EO15041 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC19.8■□□□□ 0.76
SEMA3EO15041 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
SEMA3EO15041 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SEMA3EO15041 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SEMA3EO15041 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC19.8■□□□□ 0.76
SEMA3EO15041 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
SEMA3EO15041 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SEMA3EO15041 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SEMA3EO15041 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC19.8■□□□□ 0.76
SEMA3EO15041 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
SEMA3EO15041 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC19.8■□□□□ 0.76
SEMA3EO15041 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SEMA3EO15041 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SEMA3EO15041 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SEMA3EO15041 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SEMA3EO15041 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC19.8■□□□□ 0.76
SEMA3EO15041 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC19.8■□□□□ 0.76
SEMA3EO15041 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC19.8■□□□□ 0.76
SEMA3EO15041 LINC02560-201ENST00000596379 459 ntBASIC19.8■□□□□ 0.76
SEMA3EO15041 AL365330.1-201ENST00000607459 531 ntBASIC19.8■□□□□ 0.76
SEMA3EO15041 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SEMA3EO15041 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SEMA3EO15041 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
SEMA3EO15041 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SEMA3EO15041 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC19.8■□□□□ 0.76
SEMA3EO15041 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
SEMA3EO15041 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC19.8■□□□□ 0.76
SEMA3EO15041 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC19.8■□□□□ 0.76
SEMA3EO15041 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SEMA3EO15041 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
SEMA3EO15041 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SEMA3EO15041 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC19.79■□□□□ 0.76
SEMA3EO15041 U82695.1-201ENST00000635752 1889 ntBASIC19.79■□□□□ 0.76
SEMA3EO15041 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
SEMA3EO15041 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SEMA3EO15041 AC005622.1-201ENST00000636801 1703 ntBASIC19.79■□□□□ 0.76
SEMA3EO15041 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
SEMA3EO15041 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SEMA3EO15041 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SEMA3EO15041 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC19.79■□□□□ 0.76
SEMA3EO15041 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SEMA3EO15041 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SEMA3EO15041 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
SEMA3EO15041 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SEMA3EO15041 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC19.79■□□□□ 0.76
SEMA3EO15041 RNF216P1-203ENST00000404404 2427 ntBASIC19.79■□□□□ 0.76
SEMA3EO15041 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SEMA3EO15041 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SEMA3EO15041 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC19.79■□□□□ 0.76
SEMA3EO15041 POU5F1P6-201ENST00000466990 990 ntBASIC19.79■□□□□ 0.76
SEMA3EO15041 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC19.79■□□□□ 0.76
SEMA3EO15041 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC19.79■□□□□ 0.76
SEMA3EO15041 ZNF890P-202ENST00000530367 1156 ntBASIC19.79■□□□□ 0.76
SEMA3EO15041 POLD4-211ENST00000539074 714 ntTSL 3 BASIC19.79■□□□□ 0.76
SEMA3EO15041 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC19.79■□□□□ 0.76
SEMA3EO15041 AL844908.2-201ENST00000609461 460 ntBASIC19.79■□□□□ 0.76
SEMA3EO15041 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
SEMA3EO15041 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC19.79■□□□□ 0.76
SEMA3EO15041 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC19.79■□□□□ 0.76
SEMA3EO15041 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC19.79■□□□□ 0.76
SEMA3EO15041 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC19.79■□□□□ 0.76
SEMA3EO15041 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC19.79■□□□□ 0.76
SEMA3EO15041 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SEMA3EO15041 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SEMA3EO15041 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC19.79■□□□□ 0.76
SEMA3EO15041 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
SEMA3EO15041 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
SEMA3EO15041 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SEMA3EO15041 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SEMA3EO15041 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC19.79■□□□□ 0.76
SEMA3EO15041 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SEMA3EO15041 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SEMA3EO15041 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SEMA3EO15041 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SEMA3EO15041 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SEMA3EO15041 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SEMA3EO15041 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SEMA3EO15041 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SEMA3EO15041 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms