Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 CROCCP1-201ENST00000426910 5675 ntBASIC18.89■□□□□ 0.61
ATP2A1O14983 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
ATP2A1O14983 CETN4P-206ENST00000642099 2168 ntBASIC18.89■□□□□ 0.61
ATP2A1O14983 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ATP2A1O14983 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ATP2A1O14983 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ATP2A1O14983 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC18.89■□□□□ 0.61
ATP2A1O14983 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
ATP2A1O14983 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
ATP2A1O14983 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.88■□□□□ 0.61
ATP2A1O14983 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
ATP2A1O14983 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ATP2A1O14983 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
ATP2A1O14983 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATP2A1O14983 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATP2A1O14983 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC18.88■□□□□ 0.61
ATP2A1O14983 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ATP2A1O14983 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATP2A1O14983 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATP2A1O14983 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.88■□□□□ 0.61
ATP2A1O14983 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATP2A1O14983 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ATP2A1O14983 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
ATP2A1O14983 HNRNPA3P1-201ENST00000401429 1139 ntBASIC18.88■□□□□ 0.61
ATP2A1O14983 RPL37AP1-201ENST00000412502 279 ntBASIC18.88■□□□□ 0.61
ATP2A1O14983 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC18.88■□□□□ 0.61
ATP2A1O14983 CRB3P1-201ENST00000449338 276 ntBASIC18.88■□□□□ 0.61
ATP2A1O14983 HNRNPA3P5-201ENST00000455201 833 ntBASIC18.88■□□□□ 0.61
ATP2A1O14983 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATP2A1O14983 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC18.88■□□□□ 0.61
ATP2A1O14983 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC18.88■□□□□ 0.61
ATP2A1O14983 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC18.88■□□□□ 0.61
ATP2A1O14983 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ATP2A1O14983 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATP2A1O14983 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC18.88■□□□□ 0.61
ATP2A1O14983 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC18.88■□□□□ 0.61
ATP2A1O14983 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATP2A1O14983 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATP2A1O14983 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC18.87■□□□□ 0.61
ATP2A1O14983 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ATP2A1O14983 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ATP2A1O14983 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ATP2A1O14983 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC18.87■□□□□ 0.61
ATP2A1O14983 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ATP2A1O14983 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC18.87■□□□□ 0.61
ATP2A1O14983 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
ATP2A1O14983 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ATP2A1O14983 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
ATP2A1O14983 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC18.87■□□□□ 0.61
ATP2A1O14983 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC18.87■□□□□ 0.61
ATP2A1O14983 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
ATP2A1O14983 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ATP2A1O14983 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ATP2A1O14983 RNA5SP410-201ENST00000516285 106 ntBASIC18.87■□□□□ 0.61
ATP2A1O14983 ZNF890P-202ENST00000530367 1156 ntBASIC18.87■□□□□ 0.61
ATP2A1O14983 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC18.87■□□□□ 0.61
ATP2A1O14983 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC18.87■□□□□ 0.61
ATP2A1O14983 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC18.87■□□□□ 0.61
ATP2A1O14983 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.87■□□□□ 0.61
ATP2A1O14983 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC18.87■□□□□ 0.61
ATP2A1O14983 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC18.87■□□□□ 0.61
ATP2A1O14983 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
ATP2A1O14983 AC005225.4-201ENST00000557330 545 ntBASIC18.87■□□□□ 0.61
ATP2A1O14983 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC18.87■□□□□ 0.61
ATP2A1O14983 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC18.87■□□□□ 0.61
ATP2A1O14983 AL844908.2-201ENST00000609461 460 ntBASIC18.87■□□□□ 0.61
ATP2A1O14983 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC18.87■□□□□ 0.61
ATP2A1O14983 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC18.87■□□□□ 0.61
ATP2A1O14983 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC18.87■□□□□ 0.61
ATP2A1O14983 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ATP2A1O14983 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ATP2A1O14983 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ATP2A1O14983 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ATP2A1O14983 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC18.87■□□□□ 0.61
ATP2A1O14983 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ATP2A1O14983 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC18.87■□□□□ 0.61
ATP2A1O14983 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC18.87■□□□□ 0.61
ATP2A1O14983 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
ATP2A1O14983 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
ATP2A1O14983 GPAA1P2-202ENST00000606848 1787 ntBASIC18.86■□□□□ 0.61
ATP2A1O14983 FZD10-202ENST00000539839 3282 ntBASIC18.86■□□□□ 0.61
ATP2A1O14983 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ATP2A1O14983 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ATP2A1O14983 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ATP2A1O14983 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
ATP2A1O14983 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ATP2A1O14983 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
ATP2A1O14983 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC18.86■□□□□ 0.61
ATP2A1O14983 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC18.86■□□□□ 0.61
ATP2A1O14983 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC18.86■□□□□ 0.61
ATP2A1O14983 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
ATP2A1O14983 SPTLC1P1-201ENST00000447199 261 ntBASIC18.86■□□□□ 0.61
ATP2A1O14983 CCDC74BP1-201ENST00000508880 1123 ntBASIC18.86■□□□□ 0.61
ATP2A1O14983 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
ATP2A1O14983 AC009407.1-201ENST00000568958 598 ntBASIC18.86■□□□□ 0.61
ATP2A1O14983 SPDYE22P-201ENST00000582158 798 ntBASIC18.86■□□□□ 0.61
ATP2A1O14983 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
ATP2A1O14983 AL589739.1-201ENST00000607720 493 ntBASIC18.86■□□□□ 0.61
ATP2A1O14983 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
ATP2A1O14983 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms