Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
SLC28A1O00337 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SLC28A1O00337 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
SLC28A1O00337 SDHD-206ENST00000528182 754 ntTSL 3 BASIC15.99■□□□□ 0.15
SLC28A1O00337 PGM5P2-202ENST00000637225 1043 ntBASIC15.99■□□□□ 0.15
SLC28A1O00337 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SLC28A1O00337 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SLC28A1O00337 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
SLC28A1O00337 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC15.99■□□□□ 0.15
SLC28A1O00337 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC15.99■□□□□ 0.15
SLC28A1O00337 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC15.99■□□□□ 0.15
SLC28A1O00337 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SLC28A1O00337 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SLC28A1O00337 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
SLC28A1O00337 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SLC28A1O00337 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SLC28A1O00337 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC15.99■□□□□ 0.15
SLC28A1O00337 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SLC28A1O00337 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SLC28A1O00337 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC15.98■□□□□ 0.15
SLC28A1O00337 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
SLC28A1O00337 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC15.98■□□□□ 0.15
SLC28A1O00337 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SLC28A1O00337 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SLC28A1O00337 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SLC28A1O00337 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC15.98■□□□□ 0.15
SLC28A1O00337 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC15.98■□□□□ 0.15
SLC28A1O00337 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC15.98■□□□□ 0.15
SLC28A1O00337 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SLC28A1O00337 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
SLC28A1O00337 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
SLC28A1O00337 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
SLC28A1O00337 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC15.98■□□□□ 0.15
SLC28A1O00337 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC15.98■□□□□ 0.15
SLC28A1O00337 DUSP5P1-201ENST00000441325 1139 ntBASIC15.98■□□□□ 0.15
SLC28A1O00337 SLC9A3P2-201ENST00000447821 2021 ntBASIC15.98■□□□□ 0.15
SLC28A1O00337 IGHV3-65-201ENST00000523210 341 ntBASIC15.98■□□□□ 0.15
SLC28A1O00337 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC15.98■□□□□ 0.15
SLC28A1O00337 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC15.98■□□□□ 0.15
SLC28A1O00337 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
SLC28A1O00337 RPS15-207ENST00000591032 550 ntTSL 3 BASIC15.98■□□□□ 0.15
SLC28A1O00337 RPS15-212ENST00000593052 629 ntTSL 2 BASIC15.98■□□□□ 0.15
SLC28A1O00337 IFNL4P1-201ENST00000607083 540 ntBASIC15.98■□□□□ 0.15
SLC28A1O00337 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
SLC28A1O00337 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SLC28A1O00337 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SLC28A1O00337 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SLC28A1O00337 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC15.98■□□□□ 0.15
SLC28A1O00337 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SLC28A1O00337 AL162727.3-201ENST00000635661 2787 ntBASIC15.98■□□□□ 0.15
SLC28A1O00337 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SLC28A1O00337 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SLC28A1O00337 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SLC28A1O00337 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC15.97■□□□□ 0.15
SLC28A1O00337 CICP6-201ENST00000457191 2729 ntBASIC15.97■□□□□ 0.15
SLC28A1O00337 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
SLC28A1O00337 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC15.97■□□□□ 0.15
SLC28A1O00337 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
SLC28A1O00337 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC15.97■□□□□ 0.15
SLC28A1O00337 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC15.97■□□□□ 0.15
SLC28A1O00337 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SLC28A1O00337 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SLC28A1O00337 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC15.97■□□□□ 0.15
SLC28A1O00337 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
SLC28A1O00337 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC15.97■□□□□ 0.15
SLC28A1O00337 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC15.97■□□□□ 0.15
SLC28A1O00337 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC15.97■□□□□ 0.15
SLC28A1O00337 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
SLC28A1O00337 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
SLC28A1O00337 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SLC28A1O00337 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC15.97■□□□□ 0.15
SLC28A1O00337 INIP-202ENST00000374236 874 ntTSL 2 BASIC15.97■□□□□ 0.15
SLC28A1O00337 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SLC28A1O00337 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
SLC28A1O00337 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
SLC28A1O00337 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC15.97■□□□□ 0.15
SLC28A1O00337 RNPS1P1-201ENST00000507437 918 ntBASIC15.97■□□□□ 0.15
SLC28A1O00337 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC15.97■□□□□ 0.15
SLC28A1O00337 MMP17-203ENST00000535004 719 ntTSL 3 BASIC15.97■□□□□ 0.15
SLC28A1O00337 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC15.97■□□□□ 0.15
SLC28A1O00337 RIN3-211ENST00000557762 517 ntTSL 3 BASIC15.97■□□□□ 0.15
SLC28A1O00337 BMF-207ENST00000559701 630 ntTSL 3 BASIC15.97■□□□□ 0.15
SLC28A1O00337 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC15.97■□□□□ 0.15
SLC28A1O00337 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC15.97■□□□□ 0.15
SLC28A1O00337 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC15.97■□□□□ 0.15
SLC28A1O00337 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
SLC28A1O00337 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SLC28A1O00337 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC15.97■□□□□ 0.15
SLC28A1O00337 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC15.97■□□□□ 0.15
SLC28A1O00337 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SLC28A1O00337 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC15.97■□□□□ 0.15
SLC28A1O00337 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SLC28A1O00337 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.97■□□□□ 0.15
SLC28A1O00337 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SLC28A1O00337 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
SLC28A1O00337 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC15.97■□□□□ 0.15
SLC28A1O00337 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
SLC28A1O00337 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
SLC28A1O00337 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SLC28A1O00337 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms