Protein–RNA interactions for Protein: B2RNG4

TRIM6-TRIM34, TRIM6-TRIM34 readthrough, humanhuman

Predictions only

Length 842 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-TRIM34B2RNG4 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC20.31■□□□□ 0.84
TRIM6-TRIM34B2RNG4 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM6-TRIM34B2RNG4 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
TRIM6-TRIM34B2RNG4 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC20.31■□□□□ 0.84
TRIM6-TRIM34B2RNG4 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM6-TRIM34B2RNG4 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC20.31■□□□□ 0.84
TRIM6-TRIM34B2RNG4 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM6-TRIM34B2RNG4 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM6-TRIM34B2RNG4 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
TRIM6-TRIM34B2RNG4 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM6-TRIM34B2RNG4 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
TRIM6-TRIM34B2RNG4 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
TRIM6-TRIM34B2RNG4 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
TRIM6-TRIM34B2RNG4 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM6-TRIM34B2RNG4 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
TRIM6-TRIM34B2RNG4 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM6-TRIM34B2RNG4 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC20.31■□□□□ 0.84
TRIM6-TRIM34B2RNG4 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM6-TRIM34B2RNG4 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC20.3■□□□□ 0.84
TRIM6-TRIM34B2RNG4 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC20.3■□□□□ 0.84
TRIM6-TRIM34B2RNG4 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM6-TRIM34B2RNG4 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC20.3■□□□□ 0.84
TRIM6-TRIM34B2RNG4 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC20.3■□□□□ 0.84
TRIM6-TRIM34B2RNG4 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC20.3■□□□□ 0.84
TRIM6-TRIM34B2RNG4 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC20.3■□□□□ 0.84
TRIM6-TRIM34B2RNG4 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC20.3■□□□□ 0.84
TRIM6-TRIM34B2RNG4 MTRF1LP2-201ENST00000506027 1122 ntBASIC20.3■□□□□ 0.84
TRIM6-TRIM34B2RNG4 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM6-TRIM34B2RNG4 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
TRIM6-TRIM34B2RNG4 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC20.3■□□□□ 0.84
TRIM6-TRIM34B2RNG4 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC20.3■□□□□ 0.84
TRIM6-TRIM34B2RNG4 AL031432.2-201ENST00000566714 459 ntBASIC20.3■□□□□ 0.84
TRIM6-TRIM34B2RNG4 AL928711.1-201ENST00000570165 459 ntBASIC20.3■□□□□ 0.84
TRIM6-TRIM34B2RNG4 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC20.3■□□□□ 0.84
TRIM6-TRIM34B2RNG4 BX640515.1-201ENST00000617215 977 ntBASIC20.3■□□□□ 0.84
TRIM6-TRIM34B2RNG4 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM6-TRIM34B2RNG4 GPAA1P2-202ENST00000606848 1787 ntBASIC20.3■□□□□ 0.84
TRIM6-TRIM34B2RNG4 DOC2GP-204ENST00000639052 2548 ntBASIC20.3■□□□□ 0.84
TRIM6-TRIM34B2RNG4 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM6-TRIM34B2RNG4 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC20.3■□□□□ 0.84
TRIM6-TRIM34B2RNG4 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM6-TRIM34B2RNG4 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM6-TRIM34B2RNG4 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC20.3■□□□□ 0.84
TRIM6-TRIM34B2RNG4 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM6-TRIM34B2RNG4 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
TRIM6-TRIM34B2RNG4 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM6-TRIM34B2RNG4 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM6-TRIM34B2RNG4 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC20.3■□□□□ 0.84
TRIM6-TRIM34B2RNG4 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
TRIM6-TRIM34B2RNG4 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM6-TRIM34B2RNG4 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
TRIM6-TRIM34B2RNG4 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM6-TRIM34B2RNG4 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
TRIM6-TRIM34B2RNG4 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM6-TRIM34B2RNG4 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM6-TRIM34B2RNG4 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM6-TRIM34B2RNG4 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM6-TRIM34B2RNG4 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM6-TRIM34B2RNG4 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC20.29■□□□□ 0.84
TRIM6-TRIM34B2RNG4 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM6-TRIM34B2RNG4 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM6-TRIM34B2RNG4 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM6-TRIM34B2RNG4 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM6-TRIM34B2RNG4 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC20.29■□□□□ 0.84
TRIM6-TRIM34B2RNG4 DDT-204ENST00000404092 805 ntTSL 3 BASIC20.29■□□□□ 0.84
TRIM6-TRIM34B2RNG4 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC20.29■□□□□ 0.84
TRIM6-TRIM34B2RNG4 RHOQP3-201ENST00000437982 621 ntBASIC20.29■□□□□ 0.84
TRIM6-TRIM34B2RNG4 KRT18P2-201ENST00000447938 1258 ntBASIC20.29■□□□□ 0.84
TRIM6-TRIM34B2RNG4 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC20.29■□□□□ 0.84
TRIM6-TRIM34B2RNG4 AL645728.2-201ENST00000641974 660 ntBASIC20.29■□□□□ 0.84
TRIM6-TRIM34B2RNG4 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM6-TRIM34B2RNG4 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM6-TRIM34B2RNG4 ZNF259P1-201ENST00000407656 1365 ntBASIC20.29■□□□□ 0.84
TRIM6-TRIM34B2RNG4 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM6-TRIM34B2RNG4 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM6-TRIM34B2RNG4 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM6-TRIM34B2RNG4 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM6-TRIM34B2RNG4 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM6-TRIM34B2RNG4 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM6-TRIM34B2RNG4 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
TRIM6-TRIM34B2RNG4 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC20.29■□□□□ 0.84
TRIM6-TRIM34B2RNG4 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM6-TRIM34B2RNG4 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM6-TRIM34B2RNG4 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM6-TRIM34B2RNG4 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM6-TRIM34B2RNG4 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM6-TRIM34B2RNG4 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
TRIM6-TRIM34B2RNG4 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM6-TRIM34B2RNG4 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM6-TRIM34B2RNG4 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM6-TRIM34B2RNG4 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM6-TRIM34B2RNG4 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC20.28■□□□□ 0.84
TRIM6-TRIM34B2RNG4 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM6-TRIM34B2RNG4 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM6-TRIM34B2RNG4 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM6-TRIM34B2RNG4 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC20.28■□□□□ 0.84
TRIM6-TRIM34B2RNG4 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
TRIM6-TRIM34B2RNG4 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC20.28■□□□□ 0.84
TRIM6-TRIM34B2RNG4 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC20.28■□□□□ 0.84
TRIM6-TRIM34B2RNG4 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms