Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
TMEM88BA6NKF7 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
TMEM88BA6NKF7 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.96■□□□□ 0.63
TMEM88BA6NKF7 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
TMEM88BA6NKF7 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC18.95■□□□□ 0.62
TMEM88BA6NKF7 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TMEM88BA6NKF7 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.95■□□□□ 0.62
TMEM88BA6NKF7 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
TMEM88BA6NKF7 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TMEM88BA6NKF7 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TMEM88BA6NKF7 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TMEM88BA6NKF7 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
TMEM88BA6NKF7 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC18.95■□□□□ 0.62
TMEM88BA6NKF7 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC18.95■□□□□ 0.62
TMEM88BA6NKF7 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC18.95■□□□□ 0.62
TMEM88BA6NKF7 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TMEM88BA6NKF7 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC18.95■□□□□ 0.62
TMEM88BA6NKF7 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC18.95■□□□□ 0.62
TMEM88BA6NKF7 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TMEM88BA6NKF7 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TMEM88BA6NKF7 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC18.95■□□□□ 0.62
TMEM88BA6NKF7 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC18.95■□□□□ 0.62
TMEM88BA6NKF7 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TMEM88BA6NKF7 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TMEM88BA6NKF7 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
TMEM88BA6NKF7 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC18.95■□□□□ 0.62
TMEM88BA6NKF7 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TMEM88BA6NKF7 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.95■□□□□ 0.62
TMEM88BA6NKF7 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.95■□□□□ 0.62
TMEM88BA6NKF7 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC18.95■□□□□ 0.62
TMEM88BA6NKF7 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TMEM88BA6NKF7 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
TMEM88BA6NKF7 MSTO2P-201ENST00000314835 1709 ntBASIC18.94■□□□□ 0.62
TMEM88BA6NKF7 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TMEM88BA6NKF7 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
TMEM88BA6NKF7 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TMEM88BA6NKF7 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
TMEM88BA6NKF7 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TMEM88BA6NKF7 AC091046.1-201ENST00000331871 207 ntBASIC18.94■□□□□ 0.62
TMEM88BA6NKF7 RPL17P11-201ENST00000417593 544 ntBASIC18.94■□□□□ 0.62
TMEM88BA6NKF7 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC18.94■□□□□ 0.62
TMEM88BA6NKF7 RPL13AP25-201ENST00000484130 612 ntBASIC18.94■□□□□ 0.62
TMEM88BA6NKF7 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TMEM88BA6NKF7 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC18.94■□□□□ 0.62
TMEM88BA6NKF7 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC18.94■□□□□ 0.62
TMEM88BA6NKF7 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TMEM88BA6NKF7 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
TMEM88BA6NKF7 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
TMEM88BA6NKF7 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TMEM88BA6NKF7 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
TMEM88BA6NKF7 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TMEM88BA6NKF7 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
TMEM88BA6NKF7 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC18.94■□□□□ 0.62
TMEM88BA6NKF7 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TMEM88BA6NKF7 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TMEM88BA6NKF7 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TMEM88BA6NKF7 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TMEM88BA6NKF7 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TMEM88BA6NKF7 KRT8P39-201ENST00000396270 1433 ntBASIC18.93■□□□□ 0.62
TMEM88BA6NKF7 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
TMEM88BA6NKF7 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TMEM88BA6NKF7 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC18.93■□□□□ 0.62
TMEM88BA6NKF7 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TMEM88BA6NKF7 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC18.93■□□□□ 0.62
TMEM88BA6NKF7 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC18.93■□□□□ 0.62
TMEM88BA6NKF7 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TMEM88BA6NKF7 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
TMEM88BA6NKF7 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
TMEM88BA6NKF7 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TMEM88BA6NKF7 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TMEM88BA6NKF7 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
TMEM88BA6NKF7 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TMEM88BA6NKF7 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TMEM88BA6NKF7 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
TMEM88BA6NKF7 SLC25A1P3-201ENST00000395415 828 ntBASIC18.93■□□□□ 0.62
TMEM88BA6NKF7 CNN2P8-201ENST00000421872 913 ntBASIC18.93■□□□□ 0.62
TMEM88BA6NKF7 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
TMEM88BA6NKF7 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
TMEM88BA6NKF7 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TMEM88BA6NKF7 AHRR-211ENST00000515206 462 ntTSL 5 BASIC18.93■□□□□ 0.62
TMEM88BA6NKF7 AP001063.1-201ENST00000568332 529 ntBASIC18.93■□□□□ 0.62
TMEM88BA6NKF7 NAT9-222ENST00000583476 583 ntTSL 3 BASIC18.93■□□□□ 0.62
TMEM88BA6NKF7 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC18.93■□□□□ 0.62
TMEM88BA6NKF7 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC18.93■□□□□ 0.62
TMEM88BA6NKF7 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
TMEM88BA6NKF7 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC18.93■□□□□ 0.62
TMEM88BA6NKF7 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.93■□□□□ 0.62
TMEM88BA6NKF7 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
TMEM88BA6NKF7 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
TMEM88BA6NKF7 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TMEM88BA6NKF7 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.93■□□□□ 0.62
TMEM88BA6NKF7 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TMEM88BA6NKF7 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
TMEM88BA6NKF7 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TMEM88BA6NKF7 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
TMEM88BA6NKF7 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TMEM88BA6NKF7 KRT8P37-201ENST00000451609 1420 ntBASIC18.92■□□□□ 0.62
TMEM88BA6NKF7 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC18.92■□□□□ 0.62
TMEM88BA6NKF7 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.92■□□□□ 0.62
TMEM88BA6NKF7 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms