Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
LINC01546A6NGU7 CYP2D8P-201ENST00000433633 1490 ntBASIC11.69□□□□□ -0.54
LINC01546A6NGU7 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC11.69□□□□□ -0.54
LINC01546A6NGU7 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC11.69□□□□□ -0.54
LINC01546A6NGU7 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
LINC01546A6NGU7 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
LINC01546A6NGU7 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
LINC01546A6NGU7 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
LINC01546A6NGU7 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC11.69□□□□□ -0.54
LINC01546A6NGU7 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
LINC01546A6NGU7 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
LINC01546A6NGU7 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
LINC01546A6NGU7 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC11.68□□□□□ -0.54
LINC01546A6NGU7 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
LINC01546A6NGU7 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
LINC01546A6NGU7 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
LINC01546A6NGU7 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
LINC01546A6NGU7 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
LINC01546A6NGU7 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
LINC01546A6NGU7 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
LINC01546A6NGU7 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC11.68□□□□□ -0.54
LINC01546A6NGU7 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
LINC01546A6NGU7 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC11.68□□□□□ -0.54
LINC01546A6NGU7 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC11.68□□□□□ -0.54
LINC01546A6NGU7 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
LINC01546A6NGU7 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
LINC01546A6NGU7 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
LINC01546A6NGU7 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
LINC01546A6NGU7 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
LINC01546A6NGU7 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
LINC01546A6NGU7 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC11.68□□□□□ -0.54
LINC01546A6NGU7 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC11.68□□□□□ -0.54
LINC01546A6NGU7 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
LINC01546A6NGU7 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
LINC01546A6NGU7 AL020989.1-201ENST00000422979 469 ntBASIC11.68□□□□□ -0.54
LINC01546A6NGU7 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
LINC01546A6NGU7 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC11.68□□□□□ -0.54
LINC01546A6NGU7 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC11.68□□□□□ -0.54
LINC01546A6NGU7 GUSBP12-201ENST00000513727 720 ntBASIC11.68□□□□□ -0.54
LINC01546A6NGU7 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC11.68□□□□□ -0.54
LINC01546A6NGU7 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
LINC01546A6NGU7 MIR4785-201ENST00000585005 73 ntBASIC11.68□□□□□ -0.54
LINC01546A6NGU7 AC011467.2-201ENST00000598425 242 ntBASIC11.68□□□□□ -0.54
LINC01546A6NGU7 AL138966.2-201ENST00000621997 464 ntBASIC11.68□□□□□ -0.54
LINC01546A6NGU7 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
LINC01546A6NGU7 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
LINC01546A6NGU7 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC11.68□□□□□ -0.54
LINC01546A6NGU7 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
LINC01546A6NGU7 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
LINC01546A6NGU7 AC092127.1-201ENST00000567093 3455 ntBASIC11.68□□□□□ -0.54
LINC01546A6NGU7 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
LINC01546A6NGU7 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
LINC01546A6NGU7 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC11.68□□□□□ -0.54
LINC01546A6NGU7 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC11.68□□□□□ -0.54
LINC01546A6NGU7 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
LINC01546A6NGU7 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
LINC01546A6NGU7 GSN-215ENST00000545652 2428 ntTSL 2 BASIC11.68□□□□□ -0.54
LINC01546A6NGU7 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC11.68□□□□□ -0.54
LINC01546A6NGU7 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC11.68□□□□□ -0.54
LINC01546A6NGU7 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
LINC01546A6NGU7 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC11.68□□□□□ -0.54
LINC01546A6NGU7 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
LINC01546A6NGU7 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
LINC01546A6NGU7 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
LINC01546A6NGU7 AC004817.3-201ENST00000602957 2129 ntBASIC11.68□□□□□ -0.54
LINC01546A6NGU7 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC11.68□□□□□ -0.54
LINC01546A6NGU7 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
LINC01546A6NGU7 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
LINC01546A6NGU7 Z83836.1-201ENST00000624605 1642 ntBASIC11.68□□□□□ -0.54
LINC01546A6NGU7 AC148477.5-201ENST00000625164 1645 ntBASIC11.68□□□□□ -0.54
LINC01546A6NGU7 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
LINC01546A6NGU7 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
LINC01546A6NGU7 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC11.67□□□□□ -0.54
LINC01546A6NGU7 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
LINC01546A6NGU7 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
LINC01546A6NGU7 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
LINC01546A6NGU7 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
LINC01546A6NGU7 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
LINC01546A6NGU7 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
LINC01546A6NGU7 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
LINC01546A6NGU7 PMPCAP1-201ENST00000508114 1576 ntBASIC11.67□□□□□ -0.54
LINC01546A6NGU7 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
LINC01546A6NGU7 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
LINC01546A6NGU7 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC11.67□□□□□ -0.54
LINC01546A6NGU7 AL590787.1-201ENST00000568856 1315 ntBASIC11.67□□□□□ -0.54
LINC01546A6NGU7 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
LINC01546A6NGU7 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
LINC01546A6NGU7 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
LINC01546A6NGU7 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC11.67□□□□□ -0.54
LINC01546A6NGU7 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC11.67□□□□□ -0.54
LINC01546A6NGU7 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC11.67□□□□□ -0.54
LINC01546A6NGU7 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
LINC01546A6NGU7 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC11.67□□□□□ -0.54
LINC01546A6NGU7 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
LINC01546A6NGU7 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
LINC01546A6NGU7 AC011477.6-201ENST00000604980 1927 ntBASIC11.67□□□□□ -0.54
LINC01546A6NGU7 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
LINC01546A6NGU7 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
LINC01546A6NGU7 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
LINC01546A6NGU7 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms