Protein–RNA interactions for Protein: A0A0A6YY99

TNFSF12-TNFSF13, Protein TNFSF12-TNFSF13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF12-TNFSF13A0A0A6YY99 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TNFSF12-TNFSF13A0A0A6YY99 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
TNFSF12-TNFSF13A0A0A6YY99 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TNFSF12-TNFSF13A0A0A6YY99 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
TNFSF12-TNFSF13A0A0A6YY99 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TNFSF12-TNFSF13A0A0A6YY99 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
TNFSF12-TNFSF13A0A0A6YY99 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC15.09■□□□□ 0.01
TNFSF12-TNFSF13A0A0A6YY99 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
TNFSF12-TNFSF13A0A0A6YY99 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TNFSF12-TNFSF13A0A0A6YY99 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
TNFSF12-TNFSF13A0A0A6YY99 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TNFSF12-TNFSF13A0A0A6YY99 GGT3P-204ENST00000453783 1664 ntBASIC15.09■□□□□ 0.01
TNFSF12-TNFSF13A0A0A6YY99 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TNFSF12-TNFSF13A0A0A6YY99 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TNFSF12-TNFSF13A0A0A6YY99 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
TNFSF12-TNFSF13A0A0A6YY99 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TNFSF12-TNFSF13A0A0A6YY99 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC15.09■□□□□ 0.01
TNFSF12-TNFSF13A0A0A6YY99 GGT4P-201ENST00000623672 1708 ntBASIC15.09■□□□□ 0.01
TNFSF12-TNFSF13A0A0A6YY99 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TNFSF12-TNFSF13A0A0A6YY99 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC15.09■□□□□ 0.01
TNFSF12-TNFSF13A0A0A6YY99 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC15.09■□□□□ 0.01
TNFSF12-TNFSF13A0A0A6YY99 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC15.09■□□□□ 0.01
TNFSF12-TNFSF13A0A0A6YY99 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
TNFSF12-TNFSF13A0A0A6YY99 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
TNFSF12-TNFSF13A0A0A6YY99 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TNFSF12-TNFSF13A0A0A6YY99 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TNFSF12-TNFSF13A0A0A6YY99 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TNFSF12-TNFSF13A0A0A6YY99 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
TNFSF12-TNFSF13A0A0A6YY99 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TNFSF12-TNFSF13A0A0A6YY99 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC15.09■□□□□ 0.01
TNFSF12-TNFSF13A0A0A6YY99 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TNFSF12-TNFSF13A0A0A6YY99 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
TNFSF12-TNFSF13A0A0A6YY99 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC15.09■□□□□ 0.01
TNFSF12-TNFSF13A0A0A6YY99 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC15.09■□□□□ 0.01
TNFSF12-TNFSF13A0A0A6YY99 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC15.09■□□□□ 0.01
TNFSF12-TNFSF13A0A0A6YY99 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC15.09■□□□□ 0.01
TNFSF12-TNFSF13A0A0A6YY99 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TNFSF12-TNFSF13A0A0A6YY99 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC15.09■□□□□ 0.01
TNFSF12-TNFSF13A0A0A6YY99 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TNFSF12-TNFSF13A0A0A6YY99 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TNFSF12-TNFSF13A0A0A6YY99 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC15.09■□□□□ 0.01
TNFSF12-TNFSF13A0A0A6YY99 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
TNFSF12-TNFSF13A0A0A6YY99 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TNFSF12-TNFSF13A0A0A6YY99 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TNFSF12-TNFSF13A0A0A6YY99 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC15.09■□□□□ 0.01
TNFSF12-TNFSF13A0A0A6YY99 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC15.08■□□□□ 0.01
TNFSF12-TNFSF13A0A0A6YY99 GPAA1P2-202ENST00000606848 1787 ntBASIC15.08■□□□□ 0.01
TNFSF12-TNFSF13A0A0A6YY99 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
TNFSF12-TNFSF13A0A0A6YY99 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
TNFSF12-TNFSF13A0A0A6YY99 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC15.08■□□□□ 0
TNFSF12-TNFSF13A0A0A6YY99 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
TNFSF12-TNFSF13A0A0A6YY99 AC084018.2-201ENST00000613093 2607 ntBASIC15.08■□□□□ 0
TNFSF12-TNFSF13A0A0A6YY99 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
TNFSF12-TNFSF13A0A0A6YY99 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TNFSF12-TNFSF13A0A0A6YY99 AC092474.2-201ENST00000424288 719 ntBASIC15.08■□□□□ 0
TNFSF12-TNFSF13A0A0A6YY99 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC15.08■□□□□ 0
TNFSF12-TNFSF13A0A0A6YY99 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC15.08■□□□□ 0
TNFSF12-TNFSF13A0A0A6YY99 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC15.08■□□□□ 0
TNFSF12-TNFSF13A0A0A6YY99 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC15.08■□□□□ 0
TNFSF12-TNFSF13A0A0A6YY99 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC15.08■□□□□ 0
TNFSF12-TNFSF13A0A0A6YY99 CFL1-202ENST00000524553 860 ntTSL 2 BASIC15.08■□□□□ 0
TNFSF12-TNFSF13A0A0A6YY99 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC15.08■□□□□ 0
TNFSF12-TNFSF13A0A0A6YY99 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC15.08■□□□□ 0
TNFSF12-TNFSF13A0A0A6YY99 CD7-202ENST00000578509 925 ntTSL 3 BASIC15.08■□□□□ 0
TNFSF12-TNFSF13A0A0A6YY99 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC15.08■□□□□ 0
TNFSF12-TNFSF13A0A0A6YY99 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC15.08■□□□□ 0
TNFSF12-TNFSF13A0A0A6YY99 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
TNFSF12-TNFSF13A0A0A6YY99 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
TNFSF12-TNFSF13A0A0A6YY99 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC15.08■□□□□ 0
TNFSF12-TNFSF13A0A0A6YY99 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC15.08■□□□□ 0
TNFSF12-TNFSF13A0A0A6YY99 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TNFSF12-TNFSF13A0A0A6YY99 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC15.08■□□□□ 0
TNFSF12-TNFSF13A0A0A6YY99 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC15.08■□□□□ 0
TNFSF12-TNFSF13A0A0A6YY99 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC15.08■□□□□ 0
TNFSF12-TNFSF13A0A0A6YY99 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC15.08■□□□□ 0
TNFSF12-TNFSF13A0A0A6YY99 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TNFSF12-TNFSF13A0A0A6YY99 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
TNFSF12-TNFSF13A0A0A6YY99 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.07■□□□□ 0
TNFSF12-TNFSF13A0A0A6YY99 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TNFSF12-TNFSF13A0A0A6YY99 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
TNFSF12-TNFSF13A0A0A6YY99 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
TNFSF12-TNFSF13A0A0A6YY99 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC15.07■□□□□ 0
TNFSF12-TNFSF13A0A0A6YY99 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15.07■□□□□ 0
TNFSF12-TNFSF13A0A0A6YY99 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
TNFSF12-TNFSF13A0A0A6YY99 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
TNFSF12-TNFSF13A0A0A6YY99 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC15.07■□□□□ 0
TNFSF12-TNFSF13A0A0A6YY99 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
TNFSF12-TNFSF13A0A0A6YY99 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC15.07■□□□□ 0
TNFSF12-TNFSF13A0A0A6YY99 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC15.07■□□□□ 0
TNFSF12-TNFSF13A0A0A6YY99 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC15.07■□□□□ 0
TNFSF12-TNFSF13A0A0A6YY99 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
TNFSF12-TNFSF13A0A0A6YY99 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC15.07■□□□□ 0
TNFSF12-TNFSF13A0A0A6YY99 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TNFSF12-TNFSF13A0A0A6YY99 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC15.07■□□□□ 0
TNFSF12-TNFSF13A0A0A6YY99 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TNFSF12-TNFSF13A0A0A6YY99 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC15.07■□□□□ 0
TNFSF12-TNFSF13A0A0A6YY99 AC254562.1-201ENST00000417586 456 ntBASIC15.07■□□□□ 0
TNFSF12-TNFSF13A0A0A6YY99 FAM58CP-201ENST00000435741 640 ntBASIC15.07■□□□□ 0
TNFSF12-TNFSF13A0A0A6YY99 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC15.07■□□□□ 0
TNFSF12-TNFSF13A0A0A6YY99 CEND1P1-201ENST00000451006 455 ntBASIC15.07■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms