Protein–RNA interactions for Protein: Q9Y6N3

CLCA3P, Calcium-activated chloride channel regulator family member 3, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA3PQ9Y6N3 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLCA3PQ9Y6N3 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLCA3PQ9Y6N3 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC15.74■□□□□ 0.11
CLCA3PQ9Y6N3 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLCA3PQ9Y6N3 ABR-203ENST00000536794 2213 ntTSL 2 BASIC15.74■□□□□ 0.11
CLCA3PQ9Y6N3 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLCA3PQ9Y6N3 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CLCA3PQ9Y6N3 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC15.74■□□□□ 0.11
CLCA3PQ9Y6N3 PCDHB17P-201ENST00000539533 2393 ntBASIC15.74■□□□□ 0.11
CLCA3PQ9Y6N3 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLCA3PQ9Y6N3 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLCA3PQ9Y6N3 PMP22-202ENST00000395936 816 ntTSL 3 BASIC15.74■□□□□ 0.11
CLCA3PQ9Y6N3 COX10-202ENST00000429152 875 ntTSL 2 BASIC15.74■□□□□ 0.11
CLCA3PQ9Y6N3 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC15.74■□□□□ 0.11
CLCA3PQ9Y6N3 MMP17-203ENST00000535004 719 ntTSL 3 BASIC15.74■□□□□ 0.11
CLCA3PQ9Y6N3 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC15.74■□□□□ 0.11
CLCA3PQ9Y6N3 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC15.74■□□□□ 0.11
CLCA3PQ9Y6N3 AC087641.1-201ENST00000557561 1021 ntBASIC15.74■□□□□ 0.11
CLCA3PQ9Y6N3 PDPK2P-202ENST00000562415 1191 ntBASIC15.74■□□□□ 0.11
CLCA3PQ9Y6N3 AL031432.2-201ENST00000566714 459 ntBASIC15.74■□□□□ 0.11
CLCA3PQ9Y6N3 AL928711.1-201ENST00000570165 459 ntBASIC15.74■□□□□ 0.11
CLCA3PQ9Y6N3 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC15.74■□□□□ 0.11
CLCA3PQ9Y6N3 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC15.74■□□□□ 0.11
CLCA3PQ9Y6N3 AL513190.1-201ENST00000621254 727 ntBASIC15.74■□□□□ 0.11
CLCA3PQ9Y6N3 AC092865.6-201ENST00000642101 219 ntBASIC15.74■□□□□ 0.11
CLCA3PQ9Y6N3 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CLCA3PQ9Y6N3 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CLCA3PQ9Y6N3 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC15.74■□□□□ 0.11
CLCA3PQ9Y6N3 AC106886.4-201ENST00000623557 2502 ntBASIC15.74■□□□□ 0.11
CLCA3PQ9Y6N3 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC15.74■□□□□ 0.11
CLCA3PQ9Y6N3 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC15.74■□□□□ 0.11
CLCA3PQ9Y6N3 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CLCA3PQ9Y6N3 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLCA3PQ9Y6N3 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLCA3PQ9Y6N3 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.74■□□□□ 0.11
CLCA3PQ9Y6N3 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
CLCA3PQ9Y6N3 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLCA3PQ9Y6N3 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CLCA3PQ9Y6N3 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC15.74■□□□□ 0.11
CLCA3PQ9Y6N3 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC15.74■□□□□ 0.11
CLCA3PQ9Y6N3 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
CLCA3PQ9Y6N3 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLCA3PQ9Y6N3 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLCA3PQ9Y6N3 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC15.73■□□□□ 0.11
CLCA3PQ9Y6N3 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLCA3PQ9Y6N3 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
CLCA3PQ9Y6N3 REM2-202ENST00000536884 1331 ntTSL 2 BASIC15.73■□□□□ 0.11
CLCA3PQ9Y6N3 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC15.73■□□□□ 0.11
CLCA3PQ9Y6N3 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC15.73■□□□□ 0.11
CLCA3PQ9Y6N3 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLCA3PQ9Y6N3 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC15.73■□□□□ 0.11
CLCA3PQ9Y6N3 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLCA3PQ9Y6N3 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLCA3PQ9Y6N3 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CLCA3PQ9Y6N3 ANKRD26P3-201ENST00000454044 2748 ntBASIC15.73■□□□□ 0.11
CLCA3PQ9Y6N3 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CLCA3PQ9Y6N3 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLCA3PQ9Y6N3 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
CLCA3PQ9Y6N3 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLCA3PQ9Y6N3 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC15.73■□□□□ 0.11
CLCA3PQ9Y6N3 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
CLCA3PQ9Y6N3 BX842568.4-201ENST00000421222 227 ntBASIC15.73■□□□□ 0.11
CLCA3PQ9Y6N3 AC004832.2-201ENST00000426397 482 ntBASIC15.73■□□□□ 0.11
CLCA3PQ9Y6N3 RPP21-221ENST00000428040 594 ntTSL 2 BASIC15.73■□□□□ 0.11
CLCA3PQ9Y6N3 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLCA3PQ9Y6N3 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLCA3PQ9Y6N3 AC074386.1-202ENST00000463561 864 ntBASIC15.73■□□□□ 0.11
CLCA3PQ9Y6N3 NMU-203ENST00000507338 658 ntTSL 3 BASIC15.73■□□□□ 0.11
CLCA3PQ9Y6N3 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLCA3PQ9Y6N3 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC15.73■□□□□ 0.11
CLCA3PQ9Y6N3 COX5A-206ENST00000568783 571 ntTSL 3 BASIC15.73■□□□□ 0.11
CLCA3PQ9Y6N3 MTDHP5-201ENST00000598980 586 ntBASIC15.73■□□□□ 0.11
CLCA3PQ9Y6N3 MED16-214ENST00000617672 554 ntTSL 5 BASIC15.73■□□□□ 0.11
CLCA3PQ9Y6N3 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLCA3PQ9Y6N3 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CLCA3PQ9Y6N3 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
CLCA3PQ9Y6N3 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLCA3PQ9Y6N3 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLCA3PQ9Y6N3 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLCA3PQ9Y6N3 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLCA3PQ9Y6N3 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CLCA3PQ9Y6N3 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
CLCA3PQ9Y6N3 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
CLCA3PQ9Y6N3 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC15.73■□□□□ 0.11
CLCA3PQ9Y6N3 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CLCA3PQ9Y6N3 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLCA3PQ9Y6N3 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
CLCA3PQ9Y6N3 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLCA3PQ9Y6N3 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLCA3PQ9Y6N3 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
CLCA3PQ9Y6N3 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CLCA3PQ9Y6N3 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLCA3PQ9Y6N3 HARS-203ENST00000431330 1774 ntTSL 2 BASIC15.72■□□□□ 0.11
CLCA3PQ9Y6N3 HARS-204ENST00000438307 1789 ntTSL 2 BASIC15.72■□□□□ 0.11
CLCA3PQ9Y6N3 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLCA3PQ9Y6N3 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLCA3PQ9Y6N3 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLCA3PQ9Y6N3 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLCA3PQ9Y6N3 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CLCA3PQ9Y6N3 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms