Protein–RNA interactions for Protein: Q9Y5R8

TRAPPC1, Trafficking protein particle complex subunit 1, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1Q9Y5R8 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC12.6□□□□□ -0.39
TRAPPC1Q9Y5R8 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
TRAPPC1Q9Y5R8 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRAPPC1Q9Y5R8 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
TRAPPC1Q9Y5R8 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TRAPPC1Q9Y5R8 GPR89P-201ENST00000407924 1495 ntBASIC12.59□□□□□ -0.39
TRAPPC1Q9Y5R8 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
TRAPPC1Q9Y5R8 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TRAPPC1Q9Y5R8 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TRAPPC1Q9Y5R8 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
TRAPPC1Q9Y5R8 POR-201ENST00000394893 2532 ntTSL 5 BASIC12.59□□□□□ -0.39
TRAPPC1Q9Y5R8 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TRAPPC1Q9Y5R8 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRAPPC1Q9Y5R8 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRAPPC1Q9Y5R8 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC12.59□□□□□ -0.39
TRAPPC1Q9Y5R8 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC12.59□□□□□ -0.39
TRAPPC1Q9Y5R8 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRAPPC1Q9Y5R8 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
TRAPPC1Q9Y5R8 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
TRAPPC1Q9Y5R8 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
TRAPPC1Q9Y5R8 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC12.59□□□□□ -0.39
TRAPPC1Q9Y5R8 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRAPPC1Q9Y5R8 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TRAPPC1Q9Y5R8 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRAPPC1Q9Y5R8 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
TRAPPC1Q9Y5R8 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TRAPPC1Q9Y5R8 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
TRAPPC1Q9Y5R8 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRAPPC1Q9Y5R8 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRAPPC1Q9Y5R8 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC12.59□□□□□ -0.39
TRAPPC1Q9Y5R8 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
TRAPPC1Q9Y5R8 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRAPPC1Q9Y5R8 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRAPPC1Q9Y5R8 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
TRAPPC1Q9Y5R8 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRAPPC1Q9Y5R8 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRAPPC1Q9Y5R8 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TRAPPC1Q9Y5R8 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC12.59□□□□□ -0.39
TRAPPC1Q9Y5R8 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC12.59□□□□□ -0.39
TRAPPC1Q9Y5R8 GXYLT1P2-201ENST00000433312 1230 ntBASIC12.59□□□□□ -0.39
TRAPPC1Q9Y5R8 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC12.59□□□□□ -0.39
TRAPPC1Q9Y5R8 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC12.59□□□□□ -0.39
TRAPPC1Q9Y5R8 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC12.59□□□□□ -0.39
TRAPPC1Q9Y5R8 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC12.59□□□□□ -0.39
TRAPPC1Q9Y5R8 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC12.59□□□□□ -0.39
TRAPPC1Q9Y5R8 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC12.59□□□□□ -0.39
TRAPPC1Q9Y5R8 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TRAPPC1Q9Y5R8 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC12.59□□□□□ -0.39
TRAPPC1Q9Y5R8 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC12.59□□□□□ -0.39
TRAPPC1Q9Y5R8 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC12.59□□□□□ -0.39
TRAPPC1Q9Y5R8 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRAPPC1Q9Y5R8 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TRAPPC1Q9Y5R8 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TRAPPC1Q9Y5R8 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TRAPPC1Q9Y5R8 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRAPPC1Q9Y5R8 AC097637.2-201ENST00000624096 1997 ntBASIC12.59□□□□□ -0.39
TRAPPC1Q9Y5R8 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
TRAPPC1Q9Y5R8 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TRAPPC1Q9Y5R8 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRAPPC1Q9Y5R8 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC12.59□□□□□ -0.39
TRAPPC1Q9Y5R8 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC12.59□□□□□ -0.39
TRAPPC1Q9Y5R8 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRAPPC1Q9Y5R8 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
TRAPPC1Q9Y5R8 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
TRAPPC1Q9Y5R8 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRAPPC1Q9Y5R8 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
TRAPPC1Q9Y5R8 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
TRAPPC1Q9Y5R8 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRAPPC1Q9Y5R8 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
TRAPPC1Q9Y5R8 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
TRAPPC1Q9Y5R8 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TRAPPC1Q9Y5R8 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
TRAPPC1Q9Y5R8 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC12.59□□□□□ -0.39
TRAPPC1Q9Y5R8 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRAPPC1Q9Y5R8 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
TRAPPC1Q9Y5R8 DKFZP434H168-201ENST00000567381 1905 ntBASIC12.58□□□□□ -0.39
TRAPPC1Q9Y5R8 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC12.58□□□□□ -0.39
TRAPPC1Q9Y5R8 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.39
TRAPPC1Q9Y5R8 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
TRAPPC1Q9Y5R8 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC12.58□□□□□ -0.4
TRAPPC1Q9Y5R8 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
TRAPPC1Q9Y5R8 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
TRAPPC1Q9Y5R8 AC016027.1-202ENST00000607927 1699 ntBASIC12.58□□□□□ -0.4
TRAPPC1Q9Y5R8 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TRAPPC1Q9Y5R8 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
TRAPPC1Q9Y5R8 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
TRAPPC1Q9Y5R8 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TRAPPC1Q9Y5R8 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
TRAPPC1Q9Y5R8 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
TRAPPC1Q9Y5R8 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TRAPPC1Q9Y5R8 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
TRAPPC1Q9Y5R8 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
TRAPPC1Q9Y5R8 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
TRAPPC1Q9Y5R8 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TRAPPC1Q9Y5R8 KRT18P29-201ENST00000397031 1267 ntBASIC12.58□□□□□ -0.4
TRAPPC1Q9Y5R8 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TRAPPC1Q9Y5R8 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
TRAPPC1Q9Y5R8 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
TRAPPC1Q9Y5R8 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC12.58□□□□□ -0.4
TRAPPC1Q9Y5R8 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms