Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC15.81■□□□□ 0.12
PCDHGB3Q9Y5G1 AC023511.2-201ENST00000618803 211 ntBASIC15.81■□□□□ 0.12
PCDHGB3Q9Y5G1 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PCDHGB3Q9Y5G1 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC15.81■□□□□ 0.12
PCDHGB3Q9Y5G1 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDHGB3Q9Y5G1 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PCDHGB3Q9Y5G1 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDHGB3Q9Y5G1 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PCDHGB3Q9Y5G1 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDHGB3Q9Y5G1 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDHGB3Q9Y5G1 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGB3Q9Y5G1 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGB3Q9Y5G1 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
PCDHGB3Q9Y5G1 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGB3Q9Y5G1 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC15.8■□□□□ 0.12
PCDHGB3Q9Y5G1 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGB3Q9Y5G1 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC15.8■□□□□ 0.12
PCDHGB3Q9Y5G1 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGB3Q9Y5G1 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC15.8■□□□□ 0.12
PCDHGB3Q9Y5G1 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC15.8■□□□□ 0.12
PCDHGB3Q9Y5G1 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGB3Q9Y5G1 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC15.8■□□□□ 0.12
PCDHGB3Q9Y5G1 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGB3Q9Y5G1 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC15.8■□□□□ 0.12
PCDHGB3Q9Y5G1 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC15.8■□□□□ 0.12
PCDHGB3Q9Y5G1 PGR-209ENST00000617858 2816 ntTSL 5 BASIC15.8■□□□□ 0.12
PCDHGB3Q9Y5G1 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGB3Q9Y5G1 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
PCDHGB3Q9Y5G1 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGB3Q9Y5G1 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC15.8■□□□□ 0.12
PCDHGB3Q9Y5G1 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC15.8■□□□□ 0.12
PCDHGB3Q9Y5G1 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC15.8■□□□□ 0.12
PCDHGB3Q9Y5G1 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGB3Q9Y5G1 RPL18-209ENST00000550645 463 ntTSL 5 BASIC15.8■□□□□ 0.12
PCDHGB3Q9Y5G1 RPL18-214ENST00000552588 559 ntTSL 3 BASIC15.8■□□□□ 0.12
PCDHGB3Q9Y5G1 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC15.8■□□□□ 0.12
PCDHGB3Q9Y5G1 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC15.8■□□□□ 0.12
PCDHGB3Q9Y5G1 AC105339.3-201ENST00000560043 636 ntBASIC15.8■□□□□ 0.12
PCDHGB3Q9Y5G1 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC15.8■□□□□ 0.12
PCDHGB3Q9Y5G1 PAM16-208ENST00000573553 722 ntTSL 2 BASIC15.8■□□□□ 0.12
PCDHGB3Q9Y5G1 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC15.8■□□□□ 0.12
PCDHGB3Q9Y5G1 PIN1-206ENST00000587625 878 ntTSL 2 BASIC15.8■□□□□ 0.12
PCDHGB3Q9Y5G1 AL049840.3-201ENST00000602669 611 ntBASIC15.8■□□□□ 0.12
PCDHGB3Q9Y5G1 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC15.8■□□□□ 0.12
PCDHGB3Q9Y5G1 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC15.8■□□□□ 0.12
PCDHGB3Q9Y5G1 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGB3Q9Y5G1 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGB3Q9Y5G1 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
PCDHGB3Q9Y5G1 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC15.8■□□□□ 0.12
PCDHGB3Q9Y5G1 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGB3Q9Y5G1 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC15.8■□□□□ 0.12
PCDHGB3Q9Y5G1 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC15.8■□□□□ 0.12
PCDHGB3Q9Y5G1 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC15.8■□□□□ 0.12
PCDHGB3Q9Y5G1 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGB3Q9Y5G1 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGB3Q9Y5G1 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGB3Q9Y5G1 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC15.8■□□□□ 0.12
PCDHGB3Q9Y5G1 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC15.8■□□□□ 0.12
PCDHGB3Q9Y5G1 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
PCDHGB3Q9Y5G1 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC15.79■□□□□ 0.12
PCDHGB3Q9Y5G1 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.79■□□□□ 0.12
PCDHGB3Q9Y5G1 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC15.79■□□□□ 0.12
PCDHGB3Q9Y5G1 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC15.79■□□□□ 0.12
PCDHGB3Q9Y5G1 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGB3Q9Y5G1 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGB3Q9Y5G1 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGB3Q9Y5G1 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
PCDHGB3Q9Y5G1 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC15.79■□□□□ 0.12
PCDHGB3Q9Y5G1 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
PCDHGB3Q9Y5G1 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGB3Q9Y5G1 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGB3Q9Y5G1 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
PCDHGB3Q9Y5G1 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
PCDHGB3Q9Y5G1 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGB3Q9Y5G1 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC15.79■□□□□ 0.12
PCDHGB3Q9Y5G1 AL591424.1-201ENST00000442569 1213 ntBASIC15.79■□□□□ 0.12
PCDHGB3Q9Y5G1 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC15.79■□□□□ 0.12
PCDHGB3Q9Y5G1 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC15.79■□□□□ 0.12
PCDHGB3Q9Y5G1 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
PCDHGB3Q9Y5G1 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
PCDHGB3Q9Y5G1 SDCCAG3P1-201ENST00000589292 1150 ntBASIC15.79■□□□□ 0.12
PCDHGB3Q9Y5G1 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC15.79■□□□□ 0.12
PCDHGB3Q9Y5G1 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGB3Q9Y5G1 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC15.79■□□□□ 0.12
PCDHGB3Q9Y5G1 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC15.79■□□□□ 0.12
PCDHGB3Q9Y5G1 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.79■□□□□ 0.12
PCDHGB3Q9Y5G1 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGB3Q9Y5G1 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC15.79■□□□□ 0.12
PCDHGB3Q9Y5G1 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
PCDHGB3Q9Y5G1 FUK-207ENST00000571514 3054 ntTSL 2 BASIC15.79■□□□□ 0.12
PCDHGB3Q9Y5G1 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
PCDHGB3Q9Y5G1 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC15.78■□□□□ 0.12
PCDHGB3Q9Y5G1 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC15.78■□□□□ 0.12
PCDHGB3Q9Y5G1 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC15.78■□□□□ 0.12
PCDHGB3Q9Y5G1 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGB3Q9Y5G1 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGB3Q9Y5G1 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGB3Q9Y5G1 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
PCDHGB3Q9Y5G1 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
PCDHGB3Q9Y5G1 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms