Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
R3HCC1Q9Y3T6 CICP13-201ENST00000422015 2789 ntBASIC19.09■□□□□ 0.65
R3HCC1Q9Y3T6 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC19.09■□□□□ 0.65
R3HCC1Q9Y3T6 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
R3HCC1Q9Y3T6 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
R3HCC1Q9Y3T6 COX5BP2-201ENST00000392354 334 ntBASIC19.09■□□□□ 0.65
R3HCC1Q9Y3T6 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC19.09■□□□□ 0.65
R3HCC1Q9Y3T6 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC19.09■□□□□ 0.65
R3HCC1Q9Y3T6 PON3-205ENST00000451904 1053 ntTSL 3 BASIC19.09■□□□□ 0.65
R3HCC1Q9Y3T6 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC19.09■□□□□ 0.65
R3HCC1Q9Y3T6 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
R3HCC1Q9Y3T6 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC19.09■□□□□ 0.65
R3HCC1Q9Y3T6 AL732292.2-201ENST00000609649 430 ntBASIC19.09■□□□□ 0.65
R3HCC1Q9Y3T6 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
R3HCC1Q9Y3T6 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
R3HCC1Q9Y3T6 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC19.09■□□□□ 0.65
R3HCC1Q9Y3T6 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
R3HCC1Q9Y3T6 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC19.09■□□□□ 0.65
R3HCC1Q9Y3T6 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC19.09■□□□□ 0.65
R3HCC1Q9Y3T6 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
R3HCC1Q9Y3T6 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
R3HCC1Q9Y3T6 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
R3HCC1Q9Y3T6 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
R3HCC1Q9Y3T6 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
R3HCC1Q9Y3T6 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC19.08■□□□□ 0.65
R3HCC1Q9Y3T6 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
R3HCC1Q9Y3T6 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
R3HCC1Q9Y3T6 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
R3HCC1Q9Y3T6 SNX18-202ENST00000343017 3140 ntBASIC19.08■□□□□ 0.65
R3HCC1Q9Y3T6 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC19.08■□□□□ 0.65
R3HCC1Q9Y3T6 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC19.08■□□□□ 0.65
R3HCC1Q9Y3T6 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
R3HCC1Q9Y3T6 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
R3HCC1Q9Y3T6 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
R3HCC1Q9Y3T6 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
R3HCC1Q9Y3T6 AC010460.3-201ENST00000511359 1579 ntBASIC19.08■□□□□ 0.65
R3HCC1Q9Y3T6 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
R3HCC1Q9Y3T6 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
R3HCC1Q9Y3T6 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC19.08■□□□□ 0.64
R3HCC1Q9Y3T6 FUOM-202ENST00000368551 628 ntTSL 3 BASIC19.08■□□□□ 0.64
R3HCC1Q9Y3T6 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC19.08■□□□□ 0.64
R3HCC1Q9Y3T6 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
R3HCC1Q9Y3T6 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
R3HCC1Q9Y3T6 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC19.08■□□□□ 0.64
R3HCC1Q9Y3T6 SRP19-202ENST00000445150 833 ntTSL 2 BASIC19.08■□□□□ 0.64
R3HCC1Q9Y3T6 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
R3HCC1Q9Y3T6 AC122714.2-201ENST00000502787 707 ntBASIC19.08■□□□□ 0.64
R3HCC1Q9Y3T6 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC19.08■□□□□ 0.64
R3HCC1Q9Y3T6 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
R3HCC1Q9Y3T6 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
R3HCC1Q9Y3T6 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
R3HCC1Q9Y3T6 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
R3HCC1Q9Y3T6 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
R3HCC1Q9Y3T6 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
R3HCC1Q9Y3T6 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
R3HCC1Q9Y3T6 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
R3HCC1Q9Y3T6 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
R3HCC1Q9Y3T6 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC19.08■□□□□ 0.64
R3HCC1Q9Y3T6 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC19.08■□□□□ 0.64
R3HCC1Q9Y3T6 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC19.08■□□□□ 0.64
R3HCC1Q9Y3T6 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
R3HCC1Q9Y3T6 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
R3HCC1Q9Y3T6 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
R3HCC1Q9Y3T6 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
R3HCC1Q9Y3T6 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC19.08■□□□□ 0.64
R3HCC1Q9Y3T6 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC19.08■□□□□ 0.64
R3HCC1Q9Y3T6 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC19.08■□□□□ 0.64
R3HCC1Q9Y3T6 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
R3HCC1Q9Y3T6 INTS4P1-201ENST00000438455 1935 ntBASIC19.08■□□□□ 0.64
R3HCC1Q9Y3T6 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
R3HCC1Q9Y3T6 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
R3HCC1Q9Y3T6 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC19.07■□□□□ 0.64
R3HCC1Q9Y3T6 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
R3HCC1Q9Y3T6 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
R3HCC1Q9Y3T6 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC19.07■□□□□ 0.64
R3HCC1Q9Y3T6 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
R3HCC1Q9Y3T6 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC19.07■□□□□ 0.64
R3HCC1Q9Y3T6 AMT-233ENST00000636522 1620 ntTSL 2 BASIC19.07■□□□□ 0.64
R3HCC1Q9Y3T6 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
R3HCC1Q9Y3T6 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
R3HCC1Q9Y3T6 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
R3HCC1Q9Y3T6 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
R3HCC1Q9Y3T6 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC19.07■□□□□ 0.64
R3HCC1Q9Y3T6 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
R3HCC1Q9Y3T6 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
R3HCC1Q9Y3T6 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
R3HCC1Q9Y3T6 CTNS-203ENST00000399306 803 ntTSL 3 BASIC19.07■□□□□ 0.64
R3HCC1Q9Y3T6 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC19.07■□□□□ 0.64
R3HCC1Q9Y3T6 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
R3HCC1Q9Y3T6 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
R3HCC1Q9Y3T6 IFNL4P1-201ENST00000607083 540 ntBASIC19.07■□□□□ 0.64
R3HCC1Q9Y3T6 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
R3HCC1Q9Y3T6 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC19.07■□□□□ 0.64
R3HCC1Q9Y3T6 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
R3HCC1Q9Y3T6 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC19.07■□□□□ 0.64
R3HCC1Q9Y3T6 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
R3HCC1Q9Y3T6 ACE-204ENST00000428043 5120 ntTSL 2 BASIC19.07■□□□□ 0.64
R3HCC1Q9Y3T6 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
R3HCC1Q9Y3T6 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
R3HCC1Q9Y3T6 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms