Protein–RNA interactions for Protein: Q9UPZ3

HPS5, Hermansky-Pudlak syndrome 5 protein, humanhuman

Predictions only

Length 1,129 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS5Q9UPZ3 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
HPS5Q9UPZ3 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
HPS5Q9UPZ3 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC19.7■□□□□ 0.74
HPS5Q9UPZ3 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC19.7■□□□□ 0.74
HPS5Q9UPZ3 CALY-202ENST00000368555 783 ntTSL 2 BASIC19.7■□□□□ 0.74
HPS5Q9UPZ3 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
HPS5Q9UPZ3 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
HPS5Q9UPZ3 PTPA-220ENST00000436883 532 ntTSL 4 BASIC19.7■□□□□ 0.74
HPS5Q9UPZ3 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC19.7■□□□□ 0.74
HPS5Q9UPZ3 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC19.7■□□□□ 0.74
HPS5Q9UPZ3 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC19.7■□□□□ 0.74
HPS5Q9UPZ3 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC19.7■□□□□ 0.74
HPS5Q9UPZ3 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HPS5Q9UPZ3 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HPS5Q9UPZ3 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC19.7■□□□□ 0.74
HPS5Q9UPZ3 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HPS5Q9UPZ3 AC129492.6-201ENST00000611383 1305 ntBASIC19.7■□□□□ 0.74
HPS5Q9UPZ3 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC19.7■□□□□ 0.74
HPS5Q9UPZ3 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
HPS5Q9UPZ3 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
HPS5Q9UPZ3 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HPS5Q9UPZ3 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
HPS5Q9UPZ3 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HPS5Q9UPZ3 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
HPS5Q9UPZ3 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HPS5Q9UPZ3 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC19.69■□□□□ 0.74
HPS5Q9UPZ3 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HPS5Q9UPZ3 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HPS5Q9UPZ3 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC19.69■□□□□ 0.74
HPS5Q9UPZ3 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HPS5Q9UPZ3 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC19.69■□□□□ 0.74
HPS5Q9UPZ3 AC092580.3-201ENST00000430932 139 ntBASIC19.69■□□□□ 0.74
HPS5Q9UPZ3 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HPS5Q9UPZ3 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
HPS5Q9UPZ3 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC19.69■□□□□ 0.74
HPS5Q9UPZ3 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC19.69■□□□□ 0.74
HPS5Q9UPZ3 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC19.69■□□□□ 0.74
HPS5Q9UPZ3 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC19.69■□□□□ 0.74
HPS5Q9UPZ3 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC19.69■□□□□ 0.74
HPS5Q9UPZ3 AC091167.2-201ENST00000579581 588 ntBASIC19.69■□□□□ 0.74
HPS5Q9UPZ3 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC19.69■□□□□ 0.74
HPS5Q9UPZ3 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HPS5Q9UPZ3 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
HPS5Q9UPZ3 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HPS5Q9UPZ3 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
HPS5Q9UPZ3 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC19.69■□□□□ 0.74
HPS5Q9UPZ3 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
HPS5Q9UPZ3 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
HPS5Q9UPZ3 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC19.69■□□□□ 0.74
HPS5Q9UPZ3 AC124067.4-201ENST00000519691 2379 ntBASIC19.69■□□□□ 0.74
HPS5Q9UPZ3 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
HPS5Q9UPZ3 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HPS5Q9UPZ3 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HPS5Q9UPZ3 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HPS5Q9UPZ3 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HPS5Q9UPZ3 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HPS5Q9UPZ3 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HPS5Q9UPZ3 AL118508.1-201ENST00000613502 2345 ntBASIC19.68■□□□□ 0.74
HPS5Q9UPZ3 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HPS5Q9UPZ3 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC19.68■□□□□ 0.74
HPS5Q9UPZ3 PGF-202ENST00000405431 666 ntTSL 5 BASIC19.68■□□□□ 0.74
HPS5Q9UPZ3 MIR1909-201ENST00000411312 80 ntBASIC19.68■□□□□ 0.74
HPS5Q9UPZ3 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC19.68■□□□□ 0.74
HPS5Q9UPZ3 SPDYE14P-201ENST00000442619 822 ntBASIC19.68■□□□□ 0.74
HPS5Q9UPZ3 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC19.68■□□□□ 0.74
HPS5Q9UPZ3 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC19.68■□□□□ 0.74
HPS5Q9UPZ3 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC19.68■□□□□ 0.74
HPS5Q9UPZ3 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC19.68■□□□□ 0.74
HPS5Q9UPZ3 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC19.68■□□□□ 0.74
HPS5Q9UPZ3 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC19.68■□□□□ 0.74
HPS5Q9UPZ3 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC19.68■□□□□ 0.74
HPS5Q9UPZ3 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC19.68■□□□□ 0.74
HPS5Q9UPZ3 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
HPS5Q9UPZ3 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
HPS5Q9UPZ3 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HPS5Q9UPZ3 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
HPS5Q9UPZ3 AC131009.4-201ENST00000624048 1740 ntBASIC19.68■□□□□ 0.74
HPS5Q9UPZ3 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC19.67■□□□□ 0.74
HPS5Q9UPZ3 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HPS5Q9UPZ3 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
HPS5Q9UPZ3 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HPS5Q9UPZ3 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HPS5Q9UPZ3 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
HPS5Q9UPZ3 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
HPS5Q9UPZ3 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HPS5Q9UPZ3 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC19.67■□□□□ 0.74
HPS5Q9UPZ3 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC19.67■□□□□ 0.74
HPS5Q9UPZ3 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HPS5Q9UPZ3 AC241585.1-201ENST00000433527 519 ntBASIC19.67■□□□□ 0.74
HPS5Q9UPZ3 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HPS5Q9UPZ3 PPP6R2P1-201ENST00000450880 1275 ntBASIC19.67■□□□□ 0.74
HPS5Q9UPZ3 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC19.67■□□□□ 0.74
HPS5Q9UPZ3 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC19.67■□□□□ 0.74
HPS5Q9UPZ3 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
HPS5Q9UPZ3 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC19.67■□□□□ 0.74
HPS5Q9UPZ3 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HPS5Q9UPZ3 Six3os1_5.1-201ENST00000611000 271 ntBASIC19.67■□□□□ 0.74
HPS5Q9UPZ3 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
HPS5Q9UPZ3 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HPS5Q9UPZ3 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms