Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
HACD3Q9P035 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HACD3Q9P035 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
HACD3Q9P035 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
HACD3Q9P035 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HACD3Q9P035 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HACD3Q9P035 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
HACD3Q9P035 HLA-A-202ENST00000376806 1854 ntBASIC16.82■□□□□ 0.28
HACD3Q9P035 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC16.82■□□□□ 0.28
HACD3Q9P035 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HACD3Q9P035 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HACD3Q9P035 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
HACD3Q9P035 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HACD3Q9P035 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC16.81■□□□□ 0.28
HACD3Q9P035 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
HACD3Q9P035 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HACD3Q9P035 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.81■□□□□ 0.28
HACD3Q9P035 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
HACD3Q9P035 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HACD3Q9P035 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HACD3Q9P035 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HACD3Q9P035 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HACD3Q9P035 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HACD3Q9P035 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HACD3Q9P035 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HACD3Q9P035 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HACD3Q9P035 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HACD3Q9P035 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HACD3Q9P035 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
HACD3Q9P035 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HACD3Q9P035 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
HACD3Q9P035 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
HACD3Q9P035 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HACD3Q9P035 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HACD3Q9P035 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC16.81■□□□□ 0.28
HACD3Q9P035 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC16.81■□□□□ 0.28
HACD3Q9P035 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HACD3Q9P035 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HACD3Q9P035 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
HACD3Q9P035 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.81■□□□□ 0.28
HACD3Q9P035 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.81■□□□□ 0.28
HACD3Q9P035 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.81■□□□□ 0.28
HACD3Q9P035 SNX33P1-201ENST00000592116 1762 ntBASIC16.81■□□□□ 0.28
HACD3Q9P035 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
HACD3Q9P035 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HACD3Q9P035 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HACD3Q9P035 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HACD3Q9P035 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
HACD3Q9P035 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HACD3Q9P035 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
HACD3Q9P035 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HACD3Q9P035 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HACD3Q9P035 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16.8■□□□□ 0.28
HACD3Q9P035 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
HACD3Q9P035 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
HACD3Q9P035 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.8■□□□□ 0.28
HACD3Q9P035 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
HACD3Q9P035 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HACD3Q9P035 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HACD3Q9P035 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HACD3Q9P035 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
HACD3Q9P035 AL162727.3-201ENST00000635661 2787 ntBASIC16.8■□□□□ 0.28
HACD3Q9P035 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
HACD3Q9P035 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
HACD3Q9P035 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
HACD3Q9P035 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HACD3Q9P035 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HACD3Q9P035 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HACD3Q9P035 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC16.8■□□□□ 0.28
HACD3Q9P035 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC16.8■□□□□ 0.28
HACD3Q9P035 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
HACD3Q9P035 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HACD3Q9P035 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HACD3Q9P035 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
HACD3Q9P035 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HACD3Q9P035 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HACD3Q9P035 MED15P5-201ENST00000423150 992 ntBASIC16.8■□□□□ 0.28
HACD3Q9P035 HNRNPA1P28-201ENST00000424481 961 ntBASIC16.8■□□□□ 0.28
HACD3Q9P035 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC16.8■□□□□ 0.28
HACD3Q9P035 AC007967.2-201ENST00000432613 625 ntBASIC16.8■□□□□ 0.28
HACD3Q9P035 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC16.8■□□□□ 0.28
HACD3Q9P035 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC16.8■□□□□ 0.28
HACD3Q9P035 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC16.8■□□□□ 0.28
HACD3Q9P035 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC16.8■□□□□ 0.28
HACD3Q9P035 MIR3909-201ENST00000579518 119 ntBASIC16.8■□□□□ 0.28
HACD3Q9P035 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC16.8■□□□□ 0.28
HACD3Q9P035 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC16.8■□□□□ 0.28
HACD3Q9P035 AQP6-205ENST00000618286 829 ntTSL 5 BASIC16.8■□□□□ 0.28
HACD3Q9P035 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HACD3Q9P035 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HACD3Q9P035 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
HACD3Q9P035 SLC9A3P2-201ENST00000447821 2021 ntBASIC16.8■□□□□ 0.28
HACD3Q9P035 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HACD3Q9P035 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HACD3Q9P035 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
HACD3Q9P035 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.8■□□□□ 0.28
HACD3Q9P035 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
HACD3Q9P035 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
HACD3Q9P035 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
HACD3Q9P035 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms