Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CISHQ9NSE2 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CISHQ9NSE2 RPSAP43-201ENST00000402237 625 ntBASIC17.65■□□□□ 0.42
CISHQ9NSE2 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC17.65■□□□□ 0.42
CISHQ9NSE2 VMO1-203ENST00000416307 712 ntTSL 2 BASIC17.65■□□□□ 0.42
CISHQ9NSE2 RPP21-221ENST00000428040 594 ntTSL 2 BASIC17.65■□□□□ 0.42
CISHQ9NSE2 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CISHQ9NSE2 ACTG1P14-201ENST00000446382 1122 ntBASIC17.65■□□□□ 0.42
CISHQ9NSE2 AC112482.1-201ENST00000492080 688 ntBASIC17.65■□□□□ 0.42
CISHQ9NSE2 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CISHQ9NSE2 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CISHQ9NSE2 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC17.65■□□□□ 0.42
CISHQ9NSE2 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CISHQ9NSE2 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CISHQ9NSE2 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CISHQ9NSE2 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CISHQ9NSE2 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC17.65■□□□□ 0.42
CISHQ9NSE2 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CISHQ9NSE2 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC17.65■□□□□ 0.42
CISHQ9NSE2 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.65■□□□□ 0.42
CISHQ9NSE2 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
CISHQ9NSE2 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.64■□□□□ 0.42
CISHQ9NSE2 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC17.64■□□□□ 0.42
CISHQ9NSE2 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CISHQ9NSE2 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
CISHQ9NSE2 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.64■□□□□ 0.42
CISHQ9NSE2 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC17.64■□□□□ 0.42
CISHQ9NSE2 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
CISHQ9NSE2 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CISHQ9NSE2 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC17.64■□□□□ 0.41
CISHQ9NSE2 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CISHQ9NSE2 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.64■□□□□ 0.41
CISHQ9NSE2 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CISHQ9NSE2 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CISHQ9NSE2 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CISHQ9NSE2 TFAMP1-201ENST00000412727 736 ntBASIC17.64■□□□□ 0.41
CISHQ9NSE2 UPF3AP3-201ENST00000420996 769 ntBASIC17.64■□□□□ 0.41
CISHQ9NSE2 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CISHQ9NSE2 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC17.64■□□□□ 0.41
CISHQ9NSE2 AL135744.1-201ENST00000565098 629 ntBASIC17.64■□□□□ 0.41
CISHQ9NSE2 MIR3687-2-201ENST00000577708 61 ntBASIC17.64■□□□□ 0.41
CISHQ9NSE2 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CISHQ9NSE2 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC17.64■□□□□ 0.41
CISHQ9NSE2 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CISHQ9NSE2 MIR3687-1-201ENST00000614492 61 ntBASIC17.64■□□□□ 0.41
CISHQ9NSE2 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.64■□□□□ 0.41
CISHQ9NSE2 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CISHQ9NSE2 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CISHQ9NSE2 AKAP8P1-201ENST00000434743 1349 ntBASIC17.64■□□□□ 0.41
CISHQ9NSE2 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CISHQ9NSE2 ELL2P1-201ENST00000413990 1906 ntBASIC17.64■□□□□ 0.41
CISHQ9NSE2 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
CISHQ9NSE2 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CISHQ9NSE2 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC17.64■□□□□ 0.41
CISHQ9NSE2 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.64■□□□□ 0.41
CISHQ9NSE2 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CISHQ9NSE2 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CISHQ9NSE2 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC17.64■□□□□ 0.41
CISHQ9NSE2 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC17.63■□□□□ 0.41
CISHQ9NSE2 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC17.63■□□□□ 0.41
CISHQ9NSE2 PCDH8P1-201ENST00000428983 2773 ntBASIC17.63■□□□□ 0.41
CISHQ9NSE2 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC17.63■□□□□ 0.41
CISHQ9NSE2 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CISHQ9NSE2 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
CISHQ9NSE2 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CISHQ9NSE2 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CISHQ9NSE2 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CISHQ9NSE2 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC17.63■□□□□ 0.41
CISHQ9NSE2 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CISHQ9NSE2 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CISHQ9NSE2 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC17.63■□□□□ 0.41
CISHQ9NSE2 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CISHQ9NSE2 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CISHQ9NSE2 COA5-202ENST00000409997 557 ntTSL 4 BASIC17.63■□□□□ 0.41
CISHQ9NSE2 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CISHQ9NSE2 YBX1P5-201ENST00000509441 847 ntBASIC17.63■□□□□ 0.41
CISHQ9NSE2 FAM86C2P-203ENST00000528684 1004 ntBASIC17.63■□□□□ 0.41
CISHQ9NSE2 INO80E-210ENST00000567705 880 ntTSL 3 BASIC17.63■□□□□ 0.41
CISHQ9NSE2 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CISHQ9NSE2 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC17.63■□□□□ 0.41
CISHQ9NSE2 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CISHQ9NSE2 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CISHQ9NSE2 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CISHQ9NSE2 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CISHQ9NSE2 BSG-215ENST00000618006 1329 ntTSL 2 BASIC17.63■□□□□ 0.41
CISHQ9NSE2 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.63■□□□□ 0.41
CISHQ9NSE2 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CISHQ9NSE2 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC17.63■□□□□ 0.41
CISHQ9NSE2 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CISHQ9NSE2 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC17.63■□□□□ 0.41
CISHQ9NSE2 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CISHQ9NSE2 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CISHQ9NSE2 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CISHQ9NSE2 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CISHQ9NSE2 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
CISHQ9NSE2 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CISHQ9NSE2 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CISHQ9NSE2 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CISHQ9NSE2 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC17.62■□□□□ 0.41
CISHQ9NSE2 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms