Protein–RNA interactions for Protein: Q9NSC2

SALL1, Sal-like protein 1, humanhuman

Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL1Q9NSC2 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC19.85■□□□□ 0.77
SALL1Q9NSC2 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SALL1Q9NSC2 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
SALL1Q9NSC2 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC19.85■□□□□ 0.77
SALL1Q9NSC2 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC19.85■□□□□ 0.77
SALL1Q9NSC2 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC19.85■□□□□ 0.77
SALL1Q9NSC2 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SALL1Q9NSC2 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC19.85■□□□□ 0.77
SALL1Q9NSC2 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SALL1Q9NSC2 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
SALL1Q9NSC2 AL603756.1-201ENST00000606511 2163 ntBASIC19.85■□□□□ 0.77
SALL1Q9NSC2 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
SALL1Q9NSC2 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
SALL1Q9NSC2 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SALL1Q9NSC2 PCDHA14-201ENST00000506751 2298 ntBASIC19.85■□□□□ 0.77
SALL1Q9NSC2 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19.85■□□□□ 0.77
SALL1Q9NSC2 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC19.84■□□□□ 0.77
SALL1Q9NSC2 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC19.84■□□□□ 0.77
SALL1Q9NSC2 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
SALL1Q9NSC2 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC19.84■□□□□ 0.77
SALL1Q9NSC2 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SALL1Q9NSC2 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC19.84■□□□□ 0.77
SALL1Q9NSC2 RNA5SP410-201ENST00000516285 106 ntBASIC19.84■□□□□ 0.77
SALL1Q9NSC2 MAX-210ENST00000555419 765 ntTSL 5 BASIC19.84■□□□□ 0.77
SALL1Q9NSC2 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC19.84■□□□□ 0.77
SALL1Q9NSC2 AL133215.2-201ENST00000609242 977 ntBASIC19.84■□□□□ 0.77
SALL1Q9NSC2 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC19.84■□□□□ 0.77
SALL1Q9NSC2 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC19.84■□□□□ 0.77
SALL1Q9NSC2 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC19.84■□□□□ 0.77
SALL1Q9NSC2 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC19.84■□□□□ 0.77
SALL1Q9NSC2 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SALL1Q9NSC2 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC19.84■□□□□ 0.77
SALL1Q9NSC2 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC19.84■□□□□ 0.77
SALL1Q9NSC2 AL589702.1-201ENST00000641229 1509 ntBASIC19.84■□□□□ 0.77
SALL1Q9NSC2 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
SALL1Q9NSC2 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SALL1Q9NSC2 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC19.84■□□□□ 0.77
SALL1Q9NSC2 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
SALL1Q9NSC2 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC19.84■□□□□ 0.77
SALL1Q9NSC2 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SALL1Q9NSC2 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SALL1Q9NSC2 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC19.84■□□□□ 0.77
SALL1Q9NSC2 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SALL1Q9NSC2 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SALL1Q9NSC2 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SALL1Q9NSC2 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
SALL1Q9NSC2 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
SALL1Q9NSC2 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
SALL1Q9NSC2 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SALL1Q9NSC2 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
SALL1Q9NSC2 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SALL1Q9NSC2 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC19.83■□□□□ 0.77
SALL1Q9NSC2 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SALL1Q9NSC2 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC19.83■□□□□ 0.77
SALL1Q9NSC2 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SALL1Q9NSC2 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC19.83■□□□□ 0.77
SALL1Q9NSC2 OARD1-208ENST00000469104 704 ntTSL 2 BASIC19.83■□□□□ 0.77
SALL1Q9NSC2 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC19.83■□□□□ 0.77
SALL1Q9NSC2 AC105021.1-202ENST00000570572 669 ntBASIC19.83■□□□□ 0.77
SALL1Q9NSC2 RN7SL828P-201ENST00000607615 303 ntBASIC19.83■□□□□ 0.77
SALL1Q9NSC2 AC008761.3-201ENST00000624803 892 ntBASIC19.83■□□□□ 0.77
SALL1Q9NSC2 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC19.83■□□□□ 0.77
SALL1Q9NSC2 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SALL1Q9NSC2 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SALL1Q9NSC2 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SALL1Q9NSC2 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.77
SALL1Q9NSC2 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
SALL1Q9NSC2 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SALL1Q9NSC2 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
SALL1Q9NSC2 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.76
SALL1Q9NSC2 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
SALL1Q9NSC2 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC19.83■□□□□ 0.76
SALL1Q9NSC2 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
SALL1Q9NSC2 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
SALL1Q9NSC2 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
SALL1Q9NSC2 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC19.83■□□□□ 0.76
SALL1Q9NSC2 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC19.83■□□□□ 0.76
SALL1Q9NSC2 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC19.83■□□□□ 0.76
SALL1Q9NSC2 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SALL1Q9NSC2 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC19.83■□□□□ 0.76
SALL1Q9NSC2 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SALL1Q9NSC2 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
SALL1Q9NSC2 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC19.82■□□□□ 0.76
SALL1Q9NSC2 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SALL1Q9NSC2 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC19.82■□□□□ 0.76
SALL1Q9NSC2 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC19.82■□□□□ 0.76
SALL1Q9NSC2 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SALL1Q9NSC2 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SALL1Q9NSC2 AL512638.1-201ENST00000457493 794 ntBASIC19.82■□□□□ 0.76
SALL1Q9NSC2 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC19.82■□□□□ 0.76
SALL1Q9NSC2 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SALL1Q9NSC2 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SALL1Q9NSC2 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SALL1Q9NSC2 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC19.82■□□□□ 0.76
SALL1Q9NSC2 AC061975.2-201ENST00000581722 295 ntBASIC19.82■□□□□ 0.76
SALL1Q9NSC2 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC19.82■□□□□ 0.76
SALL1Q9NSC2 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
SALL1Q9NSC2 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SALL1Q9NSC2 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC19.82■□□□□ 0.76
SALL1Q9NSC2 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms