Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
RTN4Q9NQC3 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RTN4Q9NQC3 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
RTN4Q9NQC3 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC19.71■□□□□ 0.75
RTN4Q9NQC3 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RTN4Q9NQC3 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
RTN4Q9NQC3 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
RTN4Q9NQC3 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
RTN4Q9NQC3 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC19.7■□□□□ 0.74
RTN4Q9NQC3 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RTN4Q9NQC3 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RTN4Q9NQC3 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RTN4Q9NQC3 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
RTN4Q9NQC3 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC19.7■□□□□ 0.74
RTN4Q9NQC3 LINC00167-201ENST00000530583 1419 ntBASIC19.7■□□□□ 0.74
RTN4Q9NQC3 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC19.7■□□□□ 0.74
RTN4Q9NQC3 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RTN4Q9NQC3 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC19.7■□□□□ 0.74
RTN4Q9NQC3 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC19.7■□□□□ 0.74
RTN4Q9NQC3 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC19.7■□□□□ 0.74
RTN4Q9NQC3 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC19.7■□□□□ 0.74
RTN4Q9NQC3 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC19.7■□□□□ 0.74
RTN4Q9NQC3 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC19.7■□□□□ 0.74
RTN4Q9NQC3 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
RTN4Q9NQC3 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC19.7■□□□□ 0.74
RTN4Q9NQC3 AC007041.1-201ENST00000438989 1155 ntBASIC19.7■□□□□ 0.74
RTN4Q9NQC3 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC19.7■□□□□ 0.74
RTN4Q9NQC3 AC091917.2-201ENST00000505002 744 ntBASIC19.7■□□□□ 0.74
RTN4Q9NQC3 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
RTN4Q9NQC3 AC243972.2-201ENST00000541653 991 ntBASIC19.7■□□□□ 0.74
RTN4Q9NQC3 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC19.7■□□□□ 0.74
RTN4Q9NQC3 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC19.7■□□□□ 0.74
RTN4Q9NQC3 USP36-216ENST00000589424 970 ntTSL 5 BASIC19.7■□□□□ 0.74
RTN4Q9NQC3 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RTN4Q9NQC3 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC19.7■□□□□ 0.74
RTN4Q9NQC3 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RTN4Q9NQC3 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC19.7■□□□□ 0.74
RTN4Q9NQC3 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RTN4Q9NQC3 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RTN4Q9NQC3 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RTN4Q9NQC3 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC19.7■□□□□ 0.74
RTN4Q9NQC3 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RTN4Q9NQC3 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RTN4Q9NQC3 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC19.7■□□□□ 0.74
RTN4Q9NQC3 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RTN4Q9NQC3 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC19.7■□□□□ 0.74
RTN4Q9NQC3 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC19.7■□□□□ 0.74
RTN4Q9NQC3 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
RTN4Q9NQC3 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC19.7■□□□□ 0.74
RTN4Q9NQC3 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RTN4Q9NQC3 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC19.69■□□□□ 0.74
RTN4Q9NQC3 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RTN4Q9NQC3 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
RTN4Q9NQC3 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC19.69■□□□□ 0.74
RTN4Q9NQC3 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
RTN4Q9NQC3 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RTN4Q9NQC3 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RTN4Q9NQC3 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RTN4Q9NQC3 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC19.69■□□□□ 0.74
RTN4Q9NQC3 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
RTN4Q9NQC3 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
RTN4Q9NQC3 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RTN4Q9NQC3 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RTN4Q9NQC3 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RTN4Q9NQC3 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC19.69■□□□□ 0.74
RTN4Q9NQC3 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RTN4Q9NQC3 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
RTN4Q9NQC3 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RTN4Q9NQC3 TSPY14P-201ENST00000303979 915 ntBASIC19.69■□□□□ 0.74
RTN4Q9NQC3 INGX-201ENST00000359239 846 ntBASIC19.69■□□□□ 0.74
RTN4Q9NQC3 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RTN4Q9NQC3 TSPY7P-201ENST00000431358 1114 ntBASIC19.69■□□□□ 0.74
RTN4Q9NQC3 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RTN4Q9NQC3 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC19.69■□□□□ 0.74
RTN4Q9NQC3 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
RTN4Q9NQC3 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
RTN4Q9NQC3 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
RTN4Q9NQC3 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RTN4Q9NQC3 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RTN4Q9NQC3 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC19.69■□□□□ 0.74
RTN4Q9NQC3 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
RTN4Q9NQC3 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RTN4Q9NQC3 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
RTN4Q9NQC3 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RTN4Q9NQC3 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC19.69■□□□□ 0.74
RTN4Q9NQC3 LINC01907-201ENST00000415174 2609 ntTSL 2 BASIC19.69■□□□□ 0.74
RTN4Q9NQC3 ADM-208ENST00000534464 1640 ntTSL 2 BASIC19.69■□□□□ 0.74
RTN4Q9NQC3 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RTN4Q9NQC3 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC19.68■□□□□ 0.74
RTN4Q9NQC3 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
RTN4Q9NQC3 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC19.68■□□□□ 0.74
RTN4Q9NQC3 FAAP24-202ENST00000588258 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RTN4Q9NQC3 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RTN4Q9NQC3 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RTN4Q9NQC3 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC19.68■□□□□ 0.74
RTN4Q9NQC3 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC19.68■□□□□ 0.74
RTN4Q9NQC3 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RTN4Q9NQC3 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RTN4Q9NQC3 MIR1238-201ENST00000408483 83 ntBASIC19.68■□□□□ 0.74
RTN4Q9NQC3 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms