Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRRC40Q9H9A6 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
LRRC40Q9H9A6 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRRC40Q9H9A6 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRRC40Q9H9A6 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC16.87■□□□□ 0.29
LRRC40Q9H9A6 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
LRRC40Q9H9A6 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRRC40Q9H9A6 LINC01144-201ENST00000626198 1710 ntBASIC16.87■□□□□ 0.29
LRRC40Q9H9A6 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRRC40Q9H9A6 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRRC40Q9H9A6 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRRC40Q9H9A6 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRRC40Q9H9A6 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.87■□□□□ 0.29
LRRC40Q9H9A6 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRRC40Q9H9A6 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRRC40Q9H9A6 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRRC40Q9H9A6 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.86■□□□□ 0.29
LRRC40Q9H9A6 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LRRC40Q9H9A6 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRRC40Q9H9A6 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC16.86■□□□□ 0.29
LRRC40Q9H9A6 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.86■□□□□ 0.29
LRRC40Q9H9A6 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRRC40Q9H9A6 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.86■□□□□ 0.29
LRRC40Q9H9A6 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
LRRC40Q9H9A6 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC16.86■□□□□ 0.29
LRRC40Q9H9A6 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRRC40Q9H9A6 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.86■□□□□ 0.29
LRRC40Q9H9A6 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRRC40Q9H9A6 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LRRC40Q9H9A6 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LRRC40Q9H9A6 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRRC40Q9H9A6 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRRC40Q9H9A6 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRRC40Q9H9A6 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRRC40Q9H9A6 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRRC40Q9H9A6 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRRC40Q9H9A6 CRYGEP-201ENST00000412192 528 ntBASIC16.86■□□□□ 0.29
LRRC40Q9H9A6 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC16.86■□□□□ 0.29
LRRC40Q9H9A6 RNA5SP415-201ENST00000517246 115 ntBASIC16.86■□□□□ 0.29
LRRC40Q9H9A6 IGHV3-22-201ENST00000520721 359 ntBASIC16.86■□□□□ 0.29
LRRC40Q9H9A6 PENK-208ENST00000523051 772 ntTSL 5 BASIC16.86■□□□□ 0.29
LRRC40Q9H9A6 POLD4-207ENST00000531239 584 ntTSL 2 BASIC16.86■□□□□ 0.29
LRRC40Q9H9A6 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC16.86■□□□□ 0.29
LRRC40Q9H9A6 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC16.86■□□□□ 0.29
LRRC40Q9H9A6 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRRC40Q9H9A6 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC16.86■□□□□ 0.29
LRRC40Q9H9A6 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC16.86■□□□□ 0.29
LRRC40Q9H9A6 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC16.86■□□□□ 0.29
LRRC40Q9H9A6 AC020765.3-201ENST00000613051 740 ntBASIC16.86■□□□□ 0.29
LRRC40Q9H9A6 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC16.86■□□□□ 0.29
LRRC40Q9H9A6 AL645728.2-201ENST00000641974 660 ntBASIC16.86■□□□□ 0.29
LRRC40Q9H9A6 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LRRC40Q9H9A6 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC16.86■□□□□ 0.29
LRRC40Q9H9A6 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRRC40Q9H9A6 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC16.86■□□□□ 0.29
LRRC40Q9H9A6 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC16.86■□□□□ 0.29
LRRC40Q9H9A6 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LRRC40Q9H9A6 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.86■□□□□ 0.29
LRRC40Q9H9A6 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRRC40Q9H9A6 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
LRRC40Q9H9A6 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRRC40Q9H9A6 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LRRC40Q9H9A6 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRRC40Q9H9A6 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRRC40Q9H9A6 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRRC40Q9H9A6 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC16.85■□□□□ 0.29
LRRC40Q9H9A6 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LRRC40Q9H9A6 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LRRC40Q9H9A6 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LRRC40Q9H9A6 PCDHA1-201ENST00000378133 2726 ntBASIC16.85■□□□□ 0.29
LRRC40Q9H9A6 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LRRC40Q9H9A6 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.85■□□□□ 0.29
LRRC40Q9H9A6 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.85■□□□□ 0.29
LRRC40Q9H9A6 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
LRRC40Q9H9A6 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LRRC40Q9H9A6 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LRRC40Q9H9A6 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
LRRC40Q9H9A6 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC16.85■□□□□ 0.29
LRRC40Q9H9A6 AL513480.1-201ENST00000451731 511 ntBASIC16.85■□□□□ 0.29
LRRC40Q9H9A6 AC009078.2-202ENST00000463353 338 ntBASIC16.85■□□□□ 0.29
LRRC40Q9H9A6 POU5F1P6-201ENST00000466990 990 ntBASIC16.85■□□□□ 0.29
LRRC40Q9H9A6 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
LRRC40Q9H9A6 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LRRC40Q9H9A6 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LRRC40Q9H9A6 HLA-A-201ENST00000376802 1334 ntBASIC16.85■□□□□ 0.29
LRRC40Q9H9A6 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.85■□□□□ 0.29
LRRC40Q9H9A6 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LRRC40Q9H9A6 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
LRRC40Q9H9A6 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
LRRC40Q9H9A6 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
LRRC40Q9H9A6 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC16.85■□□□□ 0.29
LRRC40Q9H9A6 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LRRC40Q9H9A6 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
LRRC40Q9H9A6 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.85■□□□□ 0.29
LRRC40Q9H9A6 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
LRRC40Q9H9A6 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LRRC40Q9H9A6 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LRRC40Q9H9A6 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC16.85■□□□□ 0.29
LRRC40Q9H9A6 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LRRC40Q9H9A6 AC046158.3-201ENST00000624947 2558 ntBASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms