Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CNTNAP3Q9BZ76 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC15.78■□□□□ 0.12
CNTNAP3Q9BZ76 AC142381.1-201ENST00000426099 345 ntBASIC15.78■□□□□ 0.12
CNTNAP3Q9BZ76 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC15.78■□□□□ 0.12
CNTNAP3Q9BZ76 AC104306.2-201ENST00000451877 341 ntBASIC15.78■□□□□ 0.12
CNTNAP3Q9BZ76 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC15.78■□□□□ 0.12
CNTNAP3Q9BZ76 AP001258.2-201ENST00000529891 490 ntBASIC15.78■□□□□ 0.12
CNTNAP3Q9BZ76 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC15.78■□□□□ 0.12
CNTNAP3Q9BZ76 ACTG1P17-201ENST00000558391 1119 ntBASIC15.78■□□□□ 0.12
CNTNAP3Q9BZ76 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC15.78■□□□□ 0.12
CNTNAP3Q9BZ76 5S_rRNA.22-201ENST00000614916 106 ntBASIC15.78■□□□□ 0.12
CNTNAP3Q9BZ76 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CNTNAP3Q9BZ76 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC15.78■□□□□ 0.12
CNTNAP3Q9BZ76 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC15.78■□□□□ 0.12
CNTNAP3Q9BZ76 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CNTNAP3Q9BZ76 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC15.78■□□□□ 0.12
CNTNAP3Q9BZ76 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CNTNAP3Q9BZ76 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CNTNAP3Q9BZ76 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC15.78■□□□□ 0.12
CNTNAP3Q9BZ76 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
CNTNAP3Q9BZ76 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC15.78■□□□□ 0.12
CNTNAP3Q9BZ76 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
CNTNAP3Q9BZ76 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
CNTNAP3Q9BZ76 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
CNTNAP3Q9BZ76 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CNTNAP3Q9BZ76 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC15.78■□□□□ 0.12
CNTNAP3Q9BZ76 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC15.77■□□□□ 0.12
CNTNAP3Q9BZ76 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CNTNAP3Q9BZ76 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC15.77■□□□□ 0.12
CNTNAP3Q9BZ76 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
CNTNAP3Q9BZ76 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
CNTNAP3Q9BZ76 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC15.77■□□□□ 0.12
CNTNAP3Q9BZ76 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC15.77■□□□□ 0.12
CNTNAP3Q9BZ76 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC15.77■□□□□ 0.12
CNTNAP3Q9BZ76 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CNTNAP3Q9BZ76 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC15.77■□□□□ 0.12
CNTNAP3Q9BZ76 MEP1AP4-201ENST00000423244 1087 ntBASIC15.77■□□□□ 0.12
CNTNAP3Q9BZ76 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC15.77■□□□□ 0.12
CNTNAP3Q9BZ76 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC15.77■□□□□ 0.12
CNTNAP3Q9BZ76 ARTN-209ENST00000479128 471 ntTSL 3 BASIC15.77■□□□□ 0.12
CNTNAP3Q9BZ76 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC15.77■□□□□ 0.12
CNTNAP3Q9BZ76 RIT1-205ENST00000539040 919 ntTSL 2 BASIC15.77■□□□□ 0.12
CNTNAP3Q9BZ76 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC15.77■□□□□ 0.12
CNTNAP3Q9BZ76 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC15.77■□□□□ 0.12
CNTNAP3Q9BZ76 APRT-204ENST00000563655 709 ntTSL 5 BASIC15.77■□□□□ 0.12
CNTNAP3Q9BZ76 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC15.77■□□□□ 0.12
CNTNAP3Q9BZ76 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC15.77■□□□□ 0.12
CNTNAP3Q9BZ76 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CNTNAP3Q9BZ76 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CNTNAP3Q9BZ76 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC15.77■□□□□ 0.11
CNTNAP3Q9BZ76 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CNTNAP3Q9BZ76 AC012569.1-201ENST00000591191 1524 ntBASIC15.77■□□□□ 0.11
CNTNAP3Q9BZ76 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CNTNAP3Q9BZ76 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
CNTNAP3Q9BZ76 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC15.77■□□□□ 0.11
CNTNAP3Q9BZ76 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CNTNAP3Q9BZ76 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
CNTNAP3Q9BZ76 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CNTNAP3Q9BZ76 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
CNTNAP3Q9BZ76 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC15.76■□□□□ 0.11
CNTNAP3Q9BZ76 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CNTNAP3Q9BZ76 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CNTNAP3Q9BZ76 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
CNTNAP3Q9BZ76 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CNTNAP3Q9BZ76 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CNTNAP3Q9BZ76 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CNTNAP3Q9BZ76 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
CNTNAP3Q9BZ76 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC15.76■□□□□ 0.11
CNTNAP3Q9BZ76 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CNTNAP3Q9BZ76 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC15.76■□□□□ 0.11
CNTNAP3Q9BZ76 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
CNTNAP3Q9BZ76 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CNTNAP3Q9BZ76 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC15.76■□□□□ 0.11
CNTNAP3Q9BZ76 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC15.76■□□□□ 0.11
CNTNAP3Q9BZ76 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CNTNAP3Q9BZ76 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CNTNAP3Q9BZ76 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC15.76■□□□□ 0.11
CNTNAP3Q9BZ76 AL353705.2-201ENST00000428243 662 ntBASIC15.76■□□□□ 0.11
CNTNAP3Q9BZ76 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC15.76■□□□□ 0.11
CNTNAP3Q9BZ76 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC15.76■□□□□ 0.11
CNTNAP3Q9BZ76 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC15.76■□□□□ 0.11
CNTNAP3Q9BZ76 RAB35-202ENST00000534951 939 ntTSL 2 BASIC15.76■□□□□ 0.11
CNTNAP3Q9BZ76 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CNTNAP3Q9BZ76 AC023310.3-201ENST00000557027 670 ntBASIC15.76■□□□□ 0.11
CNTNAP3Q9BZ76 AC100756.1-201ENST00000562736 682 ntBASIC15.76■□□□□ 0.11
CNTNAP3Q9BZ76 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC15.76■□□□□ 0.11
CNTNAP3Q9BZ76 AC138749.3-201ENST00000567691 622 ntBASIC15.76■□□□□ 0.11
CNTNAP3Q9BZ76 LITAF-210ENST00000571976 548 ntTSL 2 BASIC15.76■□□□□ 0.11
CNTNAP3Q9BZ76 LITAF-214ENST00000574703 486 ntTSL 2 BASIC15.76■□□□□ 0.11
CNTNAP3Q9BZ76 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC15.76■□□□□ 0.11
CNTNAP3Q9BZ76 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC15.76■□□□□ 0.11
CNTNAP3Q9BZ76 AC010328.2-201ENST00000597698 1111 ntBASIC15.76■□□□□ 0.11
CNTNAP3Q9BZ76 RN7SL828P-201ENST00000607615 303 ntBASIC15.76■□□□□ 0.11
CNTNAP3Q9BZ76 AC093726.1-201ENST00000608064 963 ntBASIC15.76■□□□□ 0.11
CNTNAP3Q9BZ76 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC15.76■□□□□ 0.11
CNTNAP3Q9BZ76 AC116165.1-201ENST00000611806 668 ntBASIC15.76■□□□□ 0.11
CNTNAP3Q9BZ76 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC15.76■□□□□ 0.11
CNTNAP3Q9BZ76 RPL35-206ENST00000629845 340 ntTSL 5 BASIC15.76■□□□□ 0.11
CNTNAP3Q9BZ76 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC15.76■□□□□ 0.11
CNTNAP3Q9BZ76 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms