Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
SMOQ99835 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
SMOQ99835 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SMOQ99835 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.32■□□□□ 0.36
SMOQ99835 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC17.32■□□□□ 0.36
SMOQ99835 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SMOQ99835 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SMOQ99835 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SMOQ99835 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SMOQ99835 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC17.32■□□□□ 0.36
SMOQ99835 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SMOQ99835 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
SMOQ99835 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SMOQ99835 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.32■□□□□ 0.36
SMOQ99835 PP14571-201ENST00000404327 934 ntTSL 2 BASIC17.32■□□□□ 0.36
SMOQ99835 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC17.32■□□□□ 0.36
SMOQ99835 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC17.32■□□□□ 0.36
SMOQ99835 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC17.32■□□□□ 0.36
SMOQ99835 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC17.32■□□□□ 0.36
SMOQ99835 AC098859.1-201ENST00000502915 1238 ntBASIC17.32■□□□□ 0.36
SMOQ99835 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SMOQ99835 RFPL4AP1-201ENST00000530883 850 ntBASIC17.32■□□□□ 0.36
SMOQ99835 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
SMOQ99835 VPS29-207ENST00000549970 818 ntTSL 3 BASIC17.32■□□□□ 0.36
SMOQ99835 AC025678.2-201ENST00000562061 970 ntBASIC17.32■□□□□ 0.36
SMOQ99835 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC17.32■□□□□ 0.36
SMOQ99835 Z92544.3-201ENST00000624747 417 ntBASIC17.32■□□□□ 0.36
SMOQ99835 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
SMOQ99835 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SMOQ99835 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.32■□□□□ 0.36
SMOQ99835 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC17.32■□□□□ 0.36
SMOQ99835 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
SMOQ99835 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.32■□□□□ 0.36
SMOQ99835 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SMOQ99835 RELA-227ENST00000615805 2236 ntTSL 5 BASIC17.32■□□□□ 0.36
SMOQ99835 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SMOQ99835 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
SMOQ99835 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.32■□□□□ 0.36
SMOQ99835 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SMOQ99835 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SMOQ99835 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SMOQ99835 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
SMOQ99835 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.31■□□□□ 0.36
SMOQ99835 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
SMOQ99835 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.31■□□□□ 0.36
SMOQ99835 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.31■□□□□ 0.36
SMOQ99835 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC17.31■□□□□ 0.36
SMOQ99835 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC17.31■□□□□ 0.36
SMOQ99835 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC17.31■□□□□ 0.36
SMOQ99835 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SMOQ99835 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SMOQ99835 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.31■□□□□ 0.36
SMOQ99835 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SMOQ99835 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
SMOQ99835 AC005622.1-201ENST00000636801 1703 ntBASIC17.31■□□□□ 0.36
SMOQ99835 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SMOQ99835 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SMOQ99835 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
SMOQ99835 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SMOQ99835 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
SMOQ99835 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SMOQ99835 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC17.31■□□□□ 0.36
SMOQ99835 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC17.31■□□□□ 0.36
SMOQ99835 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC17.31■□□□□ 0.36
SMOQ99835 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC17.31■□□□□ 0.36
SMOQ99835 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC17.31■□□□□ 0.36
SMOQ99835 AC069262.1-201ENST00000539058 672 ntBASIC17.31■□□□□ 0.36
SMOQ99835 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC17.31■□□□□ 0.36
SMOQ99835 RARRES2P9-201ENST00000565168 469 ntBASIC17.31■□□□□ 0.36
SMOQ99835 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SMOQ99835 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC17.31■□□□□ 0.36
SMOQ99835 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC17.31■□□□□ 0.36
SMOQ99835 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SMOQ99835 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC17.31■□□□□ 0.36
SMOQ99835 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
SMOQ99835 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SMOQ99835 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SMOQ99835 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SMOQ99835 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
SMOQ99835 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SMOQ99835 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
SMOQ99835 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
SMOQ99835 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
SMOQ99835 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SMOQ99835 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SMOQ99835 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
SMOQ99835 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC17.31■□□□□ 0.36
SMOQ99835 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC17.3■□□□□ 0.36
SMOQ99835 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.3■□□□□ 0.36
SMOQ99835 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SMOQ99835 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SMOQ99835 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.3■□□□□ 0.36
SMOQ99835 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SMOQ99835 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SMOQ99835 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SMOQ99835 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SMOQ99835 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC17.3■□□□□ 0.36
SMOQ99835 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SMOQ99835 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SMOQ99835 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms