Protein–RNA interactions for Protein: Q99466

NOTCH4, Neurogenic locus notch homolog protein 4, humanhuman

Predictions only

Length 2,003 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4Q99466 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
NOTCH4Q99466 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC16.84■□□□□ 0.29
NOTCH4Q99466 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC16.84■□□□□ 0.29
NOTCH4Q99466 AC106820.2-201ENST00000563775 3264 ntBASIC16.84■□□□□ 0.29
NOTCH4Q99466 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC16.84■□□□□ 0.29
NOTCH4Q99466 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
NOTCH4Q99466 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
NOTCH4Q99466 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.84■□□□□ 0.29
NOTCH4Q99466 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NOTCH4Q99466 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NOTCH4Q99466 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NOTCH4Q99466 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.84■□□□□ 0.29
NOTCH4Q99466 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
NOTCH4Q99466 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NOTCH4Q99466 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NOTCH4Q99466 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC16.84■□□□□ 0.29
NOTCH4Q99466 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC16.84■□□□□ 0.29
NOTCH4Q99466 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC16.84■□□□□ 0.29
NOTCH4Q99466 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC16.84■□□□□ 0.29
NOTCH4Q99466 SDHAP3-202ENST00000515467 728 ntBASIC16.84■□□□□ 0.29
NOTCH4Q99466 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NOTCH4Q99466 KRT17P8-201ENST00000540749 863 ntBASIC16.84■□□□□ 0.29
NOTCH4Q99466 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC16.84■□□□□ 0.29
NOTCH4Q99466 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
NOTCH4Q99466 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC16.84■□□□□ 0.29
NOTCH4Q99466 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NOTCH4Q99466 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
NOTCH4Q99466 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NOTCH4Q99466 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
NOTCH4Q99466 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
NOTCH4Q99466 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
NOTCH4Q99466 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC16.83■□□□□ 0.29
NOTCH4Q99466 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.29
NOTCH4Q99466 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC16.83■□□□□ 0.29
NOTCH4Q99466 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
NOTCH4Q99466 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NOTCH4Q99466 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NOTCH4Q99466 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC16.83■□□□□ 0.28
NOTCH4Q99466 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NOTCH4Q99466 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
NOTCH4Q99466 AC087499.6-201ENST00000411576 835 ntBASIC16.83■□□□□ 0.28
NOTCH4Q99466 AC245100.5-201ENST00000452108 331 ntBASIC16.83■□□□□ 0.28
NOTCH4Q99466 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC16.83■□□□□ 0.28
NOTCH4Q99466 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC16.83■□□□□ 0.28
NOTCH4Q99466 FUZ-207ENST00000526575 482 ntTSL 4 BASIC16.83■□□□□ 0.28
NOTCH4Q99466 SUOX-214ENST00000551841 906 ntTSL 3 BASIC16.83■□□□□ 0.28
NOTCH4Q99466 RRP7BP-205ENST00000566851 833 ntBASIC16.83■□□□□ 0.28
NOTCH4Q99466 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC16.83■□□□□ 0.28
NOTCH4Q99466 MIR6069-201ENST00000620069 79 ntBASIC16.83■□□□□ 0.28
NOTCH4Q99466 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC16.83■□□□□ 0.28
NOTCH4Q99466 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
NOTCH4Q99466 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NOTCH4Q99466 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
NOTCH4Q99466 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC16.83■□□□□ 0.28
NOTCH4Q99466 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NOTCH4Q99466 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NOTCH4Q99466 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NOTCH4Q99466 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC16.83■□□□□ 0.28
NOTCH4Q99466 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NOTCH4Q99466 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
NOTCH4Q99466 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
NOTCH4Q99466 U82695.1-201ENST00000635752 1889 ntBASIC16.83■□□□□ 0.28
NOTCH4Q99466 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.28
NOTCH4Q99466 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NOTCH4Q99466 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NOTCH4Q99466 AC078925.2-201ENST00000624013 1973 ntBASIC16.82■□□□□ 0.28
NOTCH4Q99466 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NOTCH4Q99466 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC16.82■□□□□ 0.28
NOTCH4Q99466 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NOTCH4Q99466 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC16.82■□□□□ 0.28
NOTCH4Q99466 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC16.82■□□□□ 0.28
NOTCH4Q99466 AL162274.1-201ENST00000617191 1098 ntBASIC16.82■□□□□ 0.28
NOTCH4Q99466 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NOTCH4Q99466 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
NOTCH4Q99466 AC005622.1-201ENST00000636801 1703 ntBASIC16.82■□□□□ 0.28
NOTCH4Q99466 CLK3P2-201ENST00000427566 1453 ntBASIC16.82■□□□□ 0.28
NOTCH4Q99466 RNF216P1-203ENST00000404404 2427 ntBASIC16.82■□□□□ 0.28
NOTCH4Q99466 AC006538.1-201ENST00000567905 1585 ntBASIC16.82■□□□□ 0.28
NOTCH4Q99466 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NOTCH4Q99466 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.82■□□□□ 0.28
NOTCH4Q99466 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16.82■□□□□ 0.28
NOTCH4Q99466 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
NOTCH4Q99466 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
NOTCH4Q99466 MYCLP2-201ENST00000449268 967 ntBASIC16.82■□□□□ 0.28
NOTCH4Q99466 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC16.82■□□□□ 0.28
NOTCH4Q99466 AL033527.4-201ENST00000641026 673 ntBASIC16.82■□□□□ 0.28
NOTCH4Q99466 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NOTCH4Q99466 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NOTCH4Q99466 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NOTCH4Q99466 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
NOTCH4Q99466 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC16.82■□□□□ 0.28
NOTCH4Q99466 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NOTCH4Q99466 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NOTCH4Q99466 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
NOTCH4Q99466 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
NOTCH4Q99466 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
NOTCH4Q99466 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
NOTCH4Q99466 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NOTCH4Q99466 Z97205.2-201ENST00000564697 1639 ntBASIC16.81■□□□□ 0.28
NOTCH4Q99466 ANKRD19P-201ENST00000338192 862 ntBASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms