Protein–RNA interactions for Protein: Q96PB1

CASD1, N-acetylneuraminate 9-O-acetyltransferase, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1Q96PB1 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC17.52■□□□□ 0.4
CASD1Q96PB1 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CASD1Q96PB1 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.52■□□□□ 0.4
CASD1Q96PB1 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CASD1Q96PB1 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CASD1Q96PB1 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
CASD1Q96PB1 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CASD1Q96PB1 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CASD1Q96PB1 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
CASD1Q96PB1 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.52■□□□□ 0.39
CASD1Q96PB1 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
CASD1Q96PB1 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
CASD1Q96PB1 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
CASD1Q96PB1 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC17.52■□□□□ 0.39
CASD1Q96PB1 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC17.52■□□□□ 0.39
CASD1Q96PB1 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CASD1Q96PB1 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CASD1Q96PB1 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CASD1Q96PB1 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CASD1Q96PB1 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.51■□□□□ 0.39
CASD1Q96PB1 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CASD1Q96PB1 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
CASD1Q96PB1 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.51■□□□□ 0.39
CASD1Q96PB1 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CASD1Q96PB1 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
CASD1Q96PB1 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.51■□□□□ 0.39
CASD1Q96PB1 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CASD1Q96PB1 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
CASD1Q96PB1 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CASD1Q96PB1 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CASD1Q96PB1 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC17.51■□□□□ 0.39
CASD1Q96PB1 AC007274.1-201ENST00000439805 662 ntBASIC17.51■□□□□ 0.39
CASD1Q96PB1 AL139010.1-201ENST00000454878 894 ntBASIC17.51■□□□□ 0.39
CASD1Q96PB1 INE1-201ENST00000456273 945 ntBASIC17.51■□□□□ 0.39
CASD1Q96PB1 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC17.51■□□□□ 0.39
CASD1Q96PB1 WASH4P-201ENST00000564273 1246 ntBASIC17.51■□□□□ 0.39
CASD1Q96PB1 AC008494.3-201ENST00000606615 944 ntBASIC17.51■□□□□ 0.39
CASD1Q96PB1 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC17.51■□□□□ 0.39
CASD1Q96PB1 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
CASD1Q96PB1 IGHV3-72-202ENST00000621503 303 ntBASIC17.51■□□□□ 0.39
CASD1Q96PB1 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CASD1Q96PB1 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CASD1Q96PB1 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.51■□□□□ 0.39
CASD1Q96PB1 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
CASD1Q96PB1 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CASD1Q96PB1 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CASD1Q96PB1 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
CASD1Q96PB1 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
CASD1Q96PB1 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
CASD1Q96PB1 SLC7A15P-201ENST00000424028 1363 ntBASIC17.51■□□□□ 0.39
CASD1Q96PB1 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.51■□□□□ 0.39
CASD1Q96PB1 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
CASD1Q96PB1 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CASD1Q96PB1 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CASD1Q96PB1 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC17.5■□□□□ 0.39
CASD1Q96PB1 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CASD1Q96PB1 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CASD1Q96PB1 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CASD1Q96PB1 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CASD1Q96PB1 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CASD1Q96PB1 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CASD1Q96PB1 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CASD1Q96PB1 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CASD1Q96PB1 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CASD1Q96PB1 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
CASD1Q96PB1 ARSEP1-201ENST00000420443 635 ntBASIC17.5■□□□□ 0.39
CASD1Q96PB1 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CASD1Q96PB1 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC17.5■□□□□ 0.39
CASD1Q96PB1 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC17.5■□□□□ 0.39
CASD1Q96PB1 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC17.5■□□□□ 0.39
CASD1Q96PB1 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC17.5■□□□□ 0.39
CASD1Q96PB1 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC17.5■□□□□ 0.39
CASD1Q96PB1 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
CASD1Q96PB1 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CASD1Q96PB1 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CASD1Q96PB1 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CASD1Q96PB1 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC17.5■□□□□ 0.39
CASD1Q96PB1 AL109936.8-201ENST00000641772 604 ntBASIC17.5■□□□□ 0.39
CASD1Q96PB1 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CASD1Q96PB1 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC17.5■□□□□ 0.39
CASD1Q96PB1 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CASD1Q96PB1 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CASD1Q96PB1 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CASD1Q96PB1 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CASD1Q96PB1 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CASD1Q96PB1 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CASD1Q96PB1 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC17.5■□□□□ 0.39
CASD1Q96PB1 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CASD1Q96PB1 PCGF3-213ENST00000620529 1899 ntBASIC17.5■□□□□ 0.39
CASD1Q96PB1 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CASD1Q96PB1 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CASD1Q96PB1 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CASD1Q96PB1 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CASD1Q96PB1 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
CASD1Q96PB1 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CASD1Q96PB1 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CASD1Q96PB1 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CASD1Q96PB1 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CASD1Q96PB1 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.49■□□□□ 0.39
CASD1Q96PB1 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms