Protein–RNA interactions for Protein: Q96NY8

NECTIN4, Nectin-4, humanhuman

Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4Q96NY8 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NECTIN4Q96NY8 VMO1-203ENST00000416307 712 ntTSL 2 BASIC17.06■□□□□ 0.32
NECTIN4Q96NY8 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC17.06■□□□□ 0.32
NECTIN4Q96NY8 HIST1H2BPS3-201ENST00000419683 341 ntBASIC17.06■□□□□ 0.32
NECTIN4Q96NY8 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC17.06■□□□□ 0.32
NECTIN4Q96NY8 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC17.06■□□□□ 0.32
NECTIN4Q96NY8 KRT223P-202ENST00000449164 1292 ntBASIC17.06■□□□□ 0.32
NECTIN4Q96NY8 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
NECTIN4Q96NY8 AC004461.2-201ENST00000629517 803 ntBASIC17.06■□□□□ 0.32
NECTIN4Q96NY8 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NECTIN4Q96NY8 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NECTIN4Q96NY8 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NECTIN4Q96NY8 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NECTIN4Q96NY8 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NECTIN4Q96NY8 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NECTIN4Q96NY8 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NECTIN4Q96NY8 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.06■□□□□ 0.32
NECTIN4Q96NY8 AC006277.1-201ENST00000624348 1610 ntBASIC17.06■□□□□ 0.32
NECTIN4Q96NY8 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC17.06■□□□□ 0.32
NECTIN4Q96NY8 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
NECTIN4Q96NY8 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
NECTIN4Q96NY8 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NECTIN4Q96NY8 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
NECTIN4Q96NY8 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
NECTIN4Q96NY8 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
NECTIN4Q96NY8 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
NECTIN4Q96NY8 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
NECTIN4Q96NY8 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NECTIN4Q96NY8 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC17.05■□□□□ 0.32
NECTIN4Q96NY8 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NECTIN4Q96NY8 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NECTIN4Q96NY8 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NECTIN4Q96NY8 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
NECTIN4Q96NY8 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
NECTIN4Q96NY8 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NECTIN4Q96NY8 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
NECTIN4Q96NY8 MPV17-208ENST00000405076 603 ntTSL 5 BASIC17.05■□□□□ 0.32
NECTIN4Q96NY8 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC17.05■□□□□ 0.32
NECTIN4Q96NY8 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC17.05■□□□□ 0.32
NECTIN4Q96NY8 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC17.05■□□□□ 0.32
NECTIN4Q96NY8 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NECTIN4Q96NY8 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC17.05■□□□□ 0.32
NECTIN4Q96NY8 AC124947.2-201ENST00000547118 1133 ntBASIC17.05■□□□□ 0.32
NECTIN4Q96NY8 ORC6-206ENST00000568364 888 ntTSL 5 BASIC17.05■□□□□ 0.32
NECTIN4Q96NY8 AC015936.2-201ENST00000593177 259 ntBASIC17.05■□□□□ 0.32
NECTIN4Q96NY8 AL606495.2-201ENST00000605867 535 ntBASIC17.05■□□□□ 0.32
NECTIN4Q96NY8 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC17.05■□□□□ 0.32
NECTIN4Q96NY8 AL033527.4-201ENST00000641026 673 ntBASIC17.05■□□□□ 0.32
NECTIN4Q96NY8 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NECTIN4Q96NY8 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NECTIN4Q96NY8 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
NECTIN4Q96NY8 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NECTIN4Q96NY8 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
NECTIN4Q96NY8 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NECTIN4Q96NY8 IMPDH1P4-201ENST00000445028 1534 ntBASIC17.05■□□□□ 0.32
NECTIN4Q96NY8 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NECTIN4Q96NY8 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NECTIN4Q96NY8 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NECTIN4Q96NY8 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
NECTIN4Q96NY8 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
NECTIN4Q96NY8 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
NECTIN4Q96NY8 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
NECTIN4Q96NY8 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NECTIN4Q96NY8 KRT8P39-201ENST00000396270 1433 ntBASIC17.04■□□□□ 0.32
NECTIN4Q96NY8 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
NECTIN4Q96NY8 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
NECTIN4Q96NY8 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NECTIN4Q96NY8 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.04■□□□□ 0.32
NECTIN4Q96NY8 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NECTIN4Q96NY8 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
NECTIN4Q96NY8 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NECTIN4Q96NY8 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NECTIN4Q96NY8 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.04■□□□□ 0.32
NECTIN4Q96NY8 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
NECTIN4Q96NY8 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NECTIN4Q96NY8 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NECTIN4Q96NY8 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NECTIN4Q96NY8 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC17.04■□□□□ 0.32
NECTIN4Q96NY8 NSL1-201ENST00000366976 722 ntTSL 2 BASIC17.04■□□□□ 0.32
NECTIN4Q96NY8 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
NECTIN4Q96NY8 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NECTIN4Q96NY8 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NECTIN4Q96NY8 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
NECTIN4Q96NY8 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC17.04■□□□□ 0.32
NECTIN4Q96NY8 AC245100.3-201ENST00000441281 285 ntBASIC17.04■□□□□ 0.32
NECTIN4Q96NY8 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC17.04■□□□□ 0.32
NECTIN4Q96NY8 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC17.04■□□□□ 0.32
NECTIN4Q96NY8 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC17.04■□□□□ 0.32
NECTIN4Q96NY8 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC17.04■□□□□ 0.32
NECTIN4Q96NY8 FTH1-202ENST00000526640 786 ntTSL 2 BASIC17.04■□□□□ 0.32
NECTIN4Q96NY8 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC17.04■□□□□ 0.32
NECTIN4Q96NY8 AC023310.3-201ENST00000557027 670 ntBASIC17.04■□□□□ 0.32
NECTIN4Q96NY8 AC100756.1-201ENST00000562736 682 ntBASIC17.04■□□□□ 0.32
NECTIN4Q96NY8 AC138749.3-201ENST00000567691 622 ntBASIC17.04■□□□□ 0.32
NECTIN4Q96NY8 MIR4525-201ENST00000580000 75 ntBASIC17.04■□□□□ 0.32
NECTIN4Q96NY8 CTBP2P3-201ENST00000585629 1255 ntBASIC17.04■□□□□ 0.32
NECTIN4Q96NY8 AC116165.1-201ENST00000611806 668 ntBASIC17.04■□□□□ 0.32
NECTIN4Q96NY8 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.04■□□□□ 0.32
NECTIN4Q96NY8 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC17.04■□□□□ 0.32
NECTIN4Q96NY8 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms