Protein–RNA interactions for Protein: Q96LX7

CCDC17, Coiled-coil domain-containing protein 17, humanhuman

Predictions only

Length 622 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC17Q96LX7 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC19.22■□□□□ 0.67
CCDC17Q96LX7 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC19.22■□□□□ 0.67
CCDC17Q96LX7 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC19.22■□□□□ 0.67
CCDC17Q96LX7 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC17Q96LX7 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC19.22■□□□□ 0.67
CCDC17Q96LX7 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC19.22■□□□□ 0.67
CCDC17Q96LX7 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC19.22■□□□□ 0.67
CCDC17Q96LX7 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC17Q96LX7 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC17Q96LX7 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC19.22■□□□□ 0.67
CCDC17Q96LX7 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC17Q96LX7 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC17Q96LX7 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC17Q96LX7 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC19.22■□□□□ 0.67
CCDC17Q96LX7 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC17Q96LX7 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC19.21■□□□□ 0.67
CCDC17Q96LX7 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC17Q96LX7 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.21■□□□□ 0.67
CCDC17Q96LX7 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
CCDC17Q96LX7 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC17Q96LX7 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC17Q96LX7 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC17Q96LX7 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC19.21■□□□□ 0.67
CCDC17Q96LX7 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
CCDC17Q96LX7 RPS19-201ENST00000221975 500 ntTSL 3 BASIC19.21■□□□□ 0.67
CCDC17Q96LX7 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC17Q96LX7 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
CCDC17Q96LX7 HLA-A-202ENST00000376806 1854 ntBASIC19.21■□□□□ 0.67
CCDC17Q96LX7 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC19.21■□□□□ 0.67
CCDC17Q96LX7 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC19.21■□□□□ 0.67
CCDC17Q96LX7 AL035633.1-201ENST00000406139 838 ntBASIC19.21■□□□□ 0.67
CCDC17Q96LX7 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC19.21■□□□□ 0.67
CCDC17Q96LX7 OARD1-208ENST00000469104 704 ntTSL 2 BASIC19.21■□□□□ 0.67
CCDC17Q96LX7 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC17Q96LX7 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC19.21■□□□□ 0.67
CCDC17Q96LX7 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC19.21■□□□□ 0.67
CCDC17Q96LX7 NAA38-207ENST00000576861 556 ntTSL 3 BASIC19.21■□□□□ 0.67
CCDC17Q96LX7 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
CCDC17Q96LX7 TEX28P1-201ENST00000613479 1221 ntBASIC19.21■□□□□ 0.67
CCDC17Q96LX7 TEX28P2-201ENST00000617764 1221 ntBASIC19.21■□□□□ 0.67
CCDC17Q96LX7 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC17Q96LX7 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC19.21■□□□□ 0.67
CCDC17Q96LX7 HFE2-206ENST00000634927 506 ntTSL 4 BASIC19.21■□□□□ 0.67
CCDC17Q96LX7 RAB34-223ENST00000636154 730 ntTSL 2 BASIC19.21■□□□□ 0.67
CCDC17Q96LX7 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC17Q96LX7 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
CCDC17Q96LX7 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC17Q96LX7 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC17Q96LX7 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC17Q96LX7 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC17Q96LX7 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC17Q96LX7 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC19.21■□□□□ 0.67
CCDC17Q96LX7 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC17Q96LX7 AC106820.2-201ENST00000563775 3264 ntBASIC19.2■□□□□ 0.66
CCDC17Q96LX7 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC17Q96LX7 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC17Q96LX7 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC17Q96LX7 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC19.2■□□□□ 0.66
CCDC17Q96LX7 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC17Q96LX7 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC19.2■□□□□ 0.66
CCDC17Q96LX7 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC17Q96LX7 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC17Q96LX7 AC005622.1-201ENST00000636801 1703 ntBASIC19.2■□□□□ 0.66
CCDC17Q96LX7 RELA-227ENST00000615805 2236 ntTSL 5 BASIC19.2■□□□□ 0.66
CCDC17Q96LX7 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC17Q96LX7 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC17Q96LX7 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC17Q96LX7 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC17Q96LX7 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC17Q96LX7 MIR661-201ENST00000384842 89 ntBASIC19.2■□□□□ 0.66
CCDC17Q96LX7 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC17Q96LX7 RBM39-205ENST00000397370 612 ntTSL 2 BASIC19.2■□□□□ 0.66
CCDC17Q96LX7 HNRNPA3P1-201ENST00000401429 1139 ntBASIC19.2■□□□□ 0.66
CCDC17Q96LX7 AC236430.1-201ENST00000402231 743 ntBASIC19.2■□□□□ 0.66
CCDC17Q96LX7 RPL37AP1-201ENST00000412502 279 ntBASIC19.2■□□□□ 0.66
CCDC17Q96LX7 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC19.2■□□□□ 0.66
CCDC17Q96LX7 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC19.2■□□□□ 0.66
CCDC17Q96LX7 HNRNPA3P5-201ENST00000455201 833 ntBASIC19.2■□□□□ 0.66
CCDC17Q96LX7 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CCDC17Q96LX7 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC19.2■□□□□ 0.66
CCDC17Q96LX7 TERF1P3-201ENST00000505638 1227 ntBASIC19.2■□□□□ 0.66
CCDC17Q96LX7 AC026979.3-201ENST00000607315 403 ntBASIC19.2■□□□□ 0.66
CCDC17Q96LX7 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
CCDC17Q96LX7 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC17Q96LX7 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC17Q96LX7 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC17Q96LX7 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC17Q96LX7 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC17Q96LX7 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC17Q96LX7 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC19.2■□□□□ 0.66
CCDC17Q96LX7 AC087499.5-201ENST00000452760 1342 ntBASIC19.2■□□□□ 0.66
CCDC17Q96LX7 RNF216P1-203ENST00000404404 2427 ntBASIC19.2■□□□□ 0.66
CCDC17Q96LX7 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC19.2■□□□□ 0.66
CCDC17Q96LX7 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC19.2■□□□□ 0.66
CCDC17Q96LX7 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CCDC17Q96LX7 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CCDC17Q96LX7 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC19.19■□□□□ 0.66
CCDC17Q96LX7 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC17Q96LX7 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC19.19■□□□□ 0.66
CCDC17Q96LX7 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms