Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.84■□□□□ 0.45
SNX27Q96L92 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SNX27Q96L92 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SNX27Q96L92 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17.84■□□□□ 0.45
SNX27Q96L92 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SNX27Q96L92 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SNX27Q96L92 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SNX27Q96L92 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SNX27Q96L92 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC17.84■□□□□ 0.45
SNX27Q96L92 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC17.84■□□□□ 0.45
SNX27Q96L92 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SNX27Q96L92 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SNX27Q96L92 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
SNX27Q96L92 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
SNX27Q96L92 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
SNX27Q96L92 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.83■□□□□ 0.45
SNX27Q96L92 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
SNX27Q96L92 AC008677.1-201ENST00000519230 1561 ntBASIC17.83■□□□□ 0.45
SNX27Q96L92 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SNX27Q96L92 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.45
SNX27Q96L92 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SNX27Q96L92 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
SNX27Q96L92 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SNX27Q96L92 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SNX27Q96L92 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
SNX27Q96L92 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC17.83■□□□□ 0.44
SNX27Q96L92 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
SNX27Q96L92 PP14571-201ENST00000404327 934 ntTSL 2 BASIC17.83■□□□□ 0.44
SNX27Q96L92 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC17.83■□□□□ 0.44
SNX27Q96L92 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC17.83■□□□□ 0.44
SNX27Q96L92 OARD1-208ENST00000469104 704 ntTSL 2 BASIC17.83■□□□□ 0.44
SNX27Q96L92 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC17.83■□□□□ 0.44
SNX27Q96L92 RARRES2P9-201ENST00000565168 469 ntBASIC17.83■□□□□ 0.44
SNX27Q96L92 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC17.83■□□□□ 0.44
SNX27Q96L92 MIR6080-201ENST00000617359 66 ntBASIC17.83■□□□□ 0.44
SNX27Q96L92 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC17.83■□□□□ 0.44
SNX27Q96L92 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SNX27Q96L92 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
SNX27Q96L92 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SNX27Q96L92 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SNX27Q96L92 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SNX27Q96L92 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.83■□□□□ 0.44
SNX27Q96L92 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
SNX27Q96L92 GGT3P-204ENST00000453783 1664 ntBASIC17.83■□□□□ 0.44
SNX27Q96L92 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC17.83■□□□□ 0.44
SNX27Q96L92 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SNX27Q96L92 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
SNX27Q96L92 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
SNX27Q96L92 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SNX27Q96L92 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
SNX27Q96L92 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SNX27Q96L92 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC17.82■□□□□ 0.44
SNX27Q96L92 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC17.82■□□□□ 0.44
SNX27Q96L92 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SNX27Q96L92 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.82■□□□□ 0.44
SNX27Q96L92 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
SNX27Q96L92 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SNX27Q96L92 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SNX27Q96L92 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC17.82■□□□□ 0.44
SNX27Q96L92 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SNX27Q96L92 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
SNX27Q96L92 AC236430.1-201ENST00000402231 743 ntBASIC17.82■□□□□ 0.44
SNX27Q96L92 HLA-DRB6-201ENST00000411500 1235 ntBASIC17.82■□□□□ 0.44
SNX27Q96L92 SPDYE7P-202ENST00000420373 878 ntBASIC17.82■□□□□ 0.44
SNX27Q96L92 AC093724.1-201ENST00000448659 1027 ntBASIC17.82■□□□□ 0.44
SNX27Q96L92 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC17.82■□□□□ 0.44
SNX27Q96L92 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC17.82■□□□□ 0.44
SNX27Q96L92 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC17.82■□□□□ 0.44
SNX27Q96L92 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC17.82■□□□□ 0.44
SNX27Q96L92 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SNX27Q96L92 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SNX27Q96L92 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
SNX27Q96L92 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SNX27Q96L92 AP3S2-216ENST00000617003 1561 ntBASIC17.82■□□□□ 0.44
SNX27Q96L92 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SNX27Q96L92 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SNX27Q96L92 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
SNX27Q96L92 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
SNX27Q96L92 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
SNX27Q96L92 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SNX27Q96L92 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SNX27Q96L92 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SNX27Q96L92 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.81■□□□□ 0.44
SNX27Q96L92 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.81■□□□□ 0.44
SNX27Q96L92 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
SNX27Q96L92 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SNX27Q96L92 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SNX27Q96L92 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SNX27Q96L92 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
SNX27Q96L92 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SNX27Q96L92 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SNX27Q96L92 TUBB3P1-201ENST00000405796 1332 ntBASIC17.81■□□□□ 0.44
SNX27Q96L92 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.81■□□□□ 0.44
SNX27Q96L92 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.81■□□□□ 0.44
SNX27Q96L92 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC17.81■□□□□ 0.44
SNX27Q96L92 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SNX27Q96L92 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
SNX27Q96L92 HLA-H-201ENST00000383620 1096 ntBASIC17.81■□□□□ 0.44
SNX27Q96L92 ARSEP1-201ENST00000420443 635 ntBASIC17.81■□□□□ 0.44
SNX27Q96L92 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms