Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
VPS33AQ96AX1 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC16.01■□□□□ 0.15
VPS33AQ96AX1 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC16.01■□□□□ 0.15
VPS33AQ96AX1 MIR5100-201ENST00000579544 119 ntBASIC16.01■□□□□ 0.15
VPS33AQ96AX1 AC064862.7-201ENST00000604520 867 ntBASIC16.01■□□□□ 0.15
VPS33AQ96AX1 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC16.01■□□□□ 0.15
VPS33AQ96AX1 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
VPS33AQ96AX1 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
VPS33AQ96AX1 AL512652.2-201ENST00000625156 1716 ntBASIC16.01■□□□□ 0.15
VPS33AQ96AX1 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
VPS33AQ96AX1 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.01■□□□□ 0.15
VPS33AQ96AX1 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
VPS33AQ96AX1 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
VPS33AQ96AX1 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
VPS33AQ96AX1 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.01■□□□□ 0.15
VPS33AQ96AX1 AL603832.2-201ENST00000566195 2125 ntBASIC16.01■□□□□ 0.15
VPS33AQ96AX1 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
VPS33AQ96AX1 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
VPS33AQ96AX1 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
VPS33AQ96AX1 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
VPS33AQ96AX1 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC16.01■□□□□ 0.15
VPS33AQ96AX1 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
VPS33AQ96AX1 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.01■□□□□ 0.15
VPS33AQ96AX1 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
VPS33AQ96AX1 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16■□□□□ 0.15
VPS33AQ96AX1 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC16■□□□□ 0.15
VPS33AQ96AX1 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
VPS33AQ96AX1 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC16■□□□□ 0.15
VPS33AQ96AX1 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
VPS33AQ96AX1 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
VPS33AQ96AX1 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16■□□□□ 0.15
VPS33AQ96AX1 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
VPS33AQ96AX1 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
VPS33AQ96AX1 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
VPS33AQ96AX1 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
VPS33AQ96AX1 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16■□□□□ 0.15
VPS33AQ96AX1 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
VPS33AQ96AX1 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC16■□□□□ 0.15
VPS33AQ96AX1 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
VPS33AQ96AX1 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC16■□□□□ 0.15
VPS33AQ96AX1 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
VPS33AQ96AX1 NUS1P2-201ENST00000417358 873 ntBASIC16■□□□□ 0.15
VPS33AQ96AX1 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC16■□□□□ 0.15
VPS33AQ96AX1 BX005266.1-201ENST00000473402 457 ntBASIC16■□□□□ 0.15
VPS33AQ96AX1 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC16■□□□□ 0.15
VPS33AQ96AX1 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC16■□□□□ 0.15
VPS33AQ96AX1 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC16■□□□□ 0.15
VPS33AQ96AX1 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC16■□□□□ 0.15
VPS33AQ96AX1 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
VPS33AQ96AX1 AC099336.1-202ENST00000602961 463 ntBASIC16■□□□□ 0.15
VPS33AQ96AX1 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC16■□□□□ 0.15
VPS33AQ96AX1 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
VPS33AQ96AX1 CCNC-219ENST00000627680 896 ntTSL 5 BASIC16■□□□□ 0.15
VPS33AQ96AX1 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16■□□□□ 0.15
VPS33AQ96AX1 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
VPS33AQ96AX1 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16■□□□□ 0.15
VPS33AQ96AX1 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC16■□□□□ 0.15
VPS33AQ96AX1 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
VPS33AQ96AX1 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16■□□□□ 0.15
VPS33AQ96AX1 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
VPS33AQ96AX1 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC16■□□□□ 0.15
VPS33AQ96AX1 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
VPS33AQ96AX1 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC16■□□□□ 0.15
VPS33AQ96AX1 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
VPS33AQ96AX1 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC16■□□□□ 0.15
VPS33AQ96AX1 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
VPS33AQ96AX1 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
VPS33AQ96AX1 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
VPS33AQ96AX1 IER3-202ENST00000376377 1350 ntBASIC16■□□□□ 0.15
VPS33AQ96AX1 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
VPS33AQ96AX1 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
VPS33AQ96AX1 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
VPS33AQ96AX1 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
VPS33AQ96AX1 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
VPS33AQ96AX1 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
VPS33AQ96AX1 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
VPS33AQ96AX1 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC15.99■□□□□ 0.15
VPS33AQ96AX1 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC15.99■□□□□ 0.15
VPS33AQ96AX1 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC15.99■□□□□ 0.15
VPS33AQ96AX1 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
VPS33AQ96AX1 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC15.99■□□□□ 0.15
VPS33AQ96AX1 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
VPS33AQ96AX1 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
VPS33AQ96AX1 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC15.99■□□□□ 0.15
VPS33AQ96AX1 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
VPS33AQ96AX1 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
VPS33AQ96AX1 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC15.99■□□□□ 0.15
VPS33AQ96AX1 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
VPS33AQ96AX1 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
VPS33AQ96AX1 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
VPS33AQ96AX1 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
VPS33AQ96AX1 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
VPS33AQ96AX1 SUPT20HL2-201ENST00000486479 2409 ntBASIC15.99■□□□□ 0.15
VPS33AQ96AX1 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC15.99■□□□□ 0.15
VPS33AQ96AX1 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
VPS33AQ96AX1 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
VPS33AQ96AX1 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
VPS33AQ96AX1 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
VPS33AQ96AX1 AL031731.1-201ENST00000642131 2094 ntBASIC15.99■□□□□ 0.15
VPS33AQ96AX1 GGT4P-201ENST00000623672 1708 ntBASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms