Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
ATP2A3Q93084 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ATP2A3Q93084 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
ATP2A3Q93084 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
ATP2A3Q93084 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ATP2A3Q93084 AC060834.1-201ENST00000443027 2032 ntBASIC17.49■□□□□ 0.39
ATP2A3Q93084 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
ATP2A3Q93084 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17.49■□□□□ 0.39
ATP2A3Q93084 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
ATP2A3Q93084 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ATP2A3Q93084 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
ATP2A3Q93084 MIR770-201ENST00000390219 98 ntBASIC17.49■□□□□ 0.39
ATP2A3Q93084 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
ATP2A3Q93084 CBR1-202ENST00000399191 838 ntTSL 3 BASIC17.49■□□□□ 0.39
ATP2A3Q93084 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
ATP2A3Q93084 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC17.49■□□□□ 0.39
ATP2A3Q93084 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC17.49■□□□□ 0.39
ATP2A3Q93084 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
ATP2A3Q93084 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC17.49■□□□□ 0.39
ATP2A3Q93084 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC17.49■□□□□ 0.39
ATP2A3Q93084 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC17.49■□□□□ 0.39
ATP2A3Q93084 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC17.49■□□□□ 0.39
ATP2A3Q93084 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ATP2A3Q93084 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
ATP2A3Q93084 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ATP2A3Q93084 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ATP2A3Q93084 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.49■□□□□ 0.39
ATP2A3Q93084 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
ATP2A3Q93084 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
ATP2A3Q93084 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.49■□□□□ 0.39
ATP2A3Q93084 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
ATP2A3Q93084 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ATP2A3Q93084 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.49■□□□□ 0.39
ATP2A3Q93084 AC092053.1-201ENST00000605787 1936 ntBASIC17.49■□□□□ 0.39
ATP2A3Q93084 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC17.49■□□□□ 0.39
ATP2A3Q93084 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ATP2A3Q93084 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
ATP2A3Q93084 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
ATP2A3Q93084 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
ATP2A3Q93084 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
ATP2A3Q93084 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
ATP2A3Q93084 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC17.48■□□□□ 0.39
ATP2A3Q93084 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC17.48■□□□□ 0.39
ATP2A3Q93084 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC17.48■□□□□ 0.39
ATP2A3Q93084 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
ATP2A3Q93084 AC011467.4-201ENST00000594891 528 ntBASIC17.48■□□□□ 0.39
ATP2A3Q93084 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC17.48■□□□□ 0.39
ATP2A3Q93084 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ATP2A3Q93084 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
ATP2A3Q93084 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.48■□□□□ 0.39
ATP2A3Q93084 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ATP2A3Q93084 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
ATP2A3Q93084 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
ATP2A3Q93084 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ATP2A3Q93084 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC17.48■□□□□ 0.39
ATP2A3Q93084 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ATP2A3Q93084 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ATP2A3Q93084 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.48■□□□□ 0.39
ATP2A3Q93084 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ATP2A3Q93084 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ATP2A3Q93084 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ATP2A3Q93084 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC17.48■□□□□ 0.39
ATP2A3Q93084 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ATP2A3Q93084 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.47■□□□□ 0.39
ATP2A3Q93084 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ATP2A3Q93084 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ATP2A3Q93084 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
ATP2A3Q93084 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC17.47■□□□□ 0.39
ATP2A3Q93084 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC17.47■□□□□ 0.39
ATP2A3Q93084 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.47■□□□□ 0.39
ATP2A3Q93084 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.47■□□□□ 0.39
ATP2A3Q93084 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ATP2A3Q93084 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ATP2A3Q93084 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ATP2A3Q93084 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ATP2A3Q93084 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
ATP2A3Q93084 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
ATP2A3Q93084 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ATP2A3Q93084 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
ATP2A3Q93084 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ATP2A3Q93084 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
ATP2A3Q93084 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
ATP2A3Q93084 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ATP2A3Q93084 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.47■□□□□ 0.39
ATP2A3Q93084 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ATP2A3Q93084 AL627223.1-201ENST00000416693 442 ntBASIC17.47■□□□□ 0.39
ATP2A3Q93084 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC17.47■□□□□ 0.39
ATP2A3Q93084 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC17.47■□□□□ 0.39
ATP2A3Q93084 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC17.47■□□□□ 0.39
ATP2A3Q93084 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC17.47■□□□□ 0.39
ATP2A3Q93084 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
ATP2A3Q93084 MIR3197-201ENST00000582241 73 ntBASIC17.47■□□□□ 0.39
ATP2A3Q93084 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC17.47■□□□□ 0.39
ATP2A3Q93084 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC17.47■□□□□ 0.39
ATP2A3Q93084 AL161645.1-201ENST00000622716 1255 ntBASIC17.47■□□□□ 0.39
ATP2A3Q93084 AC009093.7-201ENST00000623853 1223 ntBASIC17.47■□□□□ 0.39
ATP2A3Q93084 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ATP2A3Q93084 LINC00628-201ENST00000628516 1289 ntBASIC17.47■□□□□ 0.39
ATP2A3Q93084 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ATP2A3Q93084 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms