Protein–RNA interactions for Protein: Q92623

TTC9, Tetratricopeptide repeat protein 9A, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9Q92623 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC15.82■□□□□ 0.12
TTC9Q92623 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC15.82■□□□□ 0.12
TTC9Q92623 AC009118.2-201ENST00000613275 655 ntBASIC15.82■□□□□ 0.12
TTC9Q92623 MIR6799-201ENST00000620297 69 ntBASIC15.82■□□□□ 0.12
TTC9Q92623 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC15.82■□□□□ 0.12
TTC9Q92623 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC15.82■□□□□ 0.12
TTC9Q92623 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TTC9Q92623 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC15.82■□□□□ 0.12
TTC9Q92623 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC15.82■□□□□ 0.12
TTC9Q92623 AC129492.6-201ENST00000611383 1305 ntBASIC15.82■□□□□ 0.12
TTC9Q92623 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC15.82■□□□□ 0.12
TTC9Q92623 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TTC9Q92623 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TTC9Q92623 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TTC9Q92623 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC15.82■□□□□ 0.12
TTC9Q92623 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
TTC9Q92623 AC093525.9-201ENST00000624961 1746 ntBASIC15.82■□□□□ 0.12
TTC9Q92623 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TTC9Q92623 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
TTC9Q92623 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
TTC9Q92623 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TTC9Q92623 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TTC9Q92623 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
TTC9Q92623 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TTC9Q92623 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC15.82■□□□□ 0.12
TTC9Q92623 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TTC9Q92623 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
TTC9Q92623 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
TTC9Q92623 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TTC9Q92623 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TTC9Q92623 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TTC9Q92623 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TTC9Q92623 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TTC9Q92623 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TTC9Q92623 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TTC9Q92623 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TTC9Q92623 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TTC9Q92623 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TTC9Q92623 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
TTC9Q92623 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
TTC9Q92623 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TTC9Q92623 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TTC9Q92623 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TTC9Q92623 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC15.81■□□□□ 0.12
TTC9Q92623 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TTC9Q92623 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC15.81■□□□□ 0.12
TTC9Q92623 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
TTC9Q92623 U91328.1-201ENST00000437528 223 ntBASIC15.81■□□□□ 0.12
TTC9Q92623 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TTC9Q92623 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TTC9Q92623 PPP6R2P1-201ENST00000450880 1275 ntBASIC15.81■□□□□ 0.12
TTC9Q92623 KRT17P7-201ENST00000451704 1104 ntBASIC15.81■□□□□ 0.12
TTC9Q92623 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TTC9Q92623 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC15.81■□□□□ 0.12
TTC9Q92623 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TTC9Q92623 SLC25A6P2-201ENST00000497974 877 ntBASIC15.81■□□□□ 0.12
TTC9Q92623 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TTC9Q92623 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC15.81■□□□□ 0.12
TTC9Q92623 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TTC9Q92623 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC15.81■□□□□ 0.12
TTC9Q92623 THTPA-204ENST00000554970 569 ntTSL 4 BASIC15.81■□□□□ 0.12
TTC9Q92623 THTPA-206ENST00000556015 535 ntTSL 3 BASIC15.81■□□□□ 0.12
TTC9Q92623 KRT8P23-201ENST00000560090 1207 ntBASIC15.81■□□□□ 0.12
TTC9Q92623 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC15.81■□□□□ 0.12
TTC9Q92623 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC15.81■□□□□ 0.12
TTC9Q92623 AL023806.1-201ENST00000603994 1649 ntBASIC15.81■□□□□ 0.12
TTC9Q92623 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC15.81■□□□□ 0.12
TTC9Q92623 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TTC9Q92623 AC084121.4-201ENST00000641598 221 ntBASIC15.81■□□□□ 0.12
TTC9Q92623 AF228730.8-201ENST00000642140 221 ntBASIC15.81■□□□□ 0.12
TTC9Q92623 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC15.81■□□□□ 0.12
TTC9Q92623 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TTC9Q92623 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TTC9Q92623 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TTC9Q92623 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TTC9Q92623 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC15.8■□□□□ 0.12
TTC9Q92623 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
TTC9Q92623 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC15.8■□□□□ 0.12
TTC9Q92623 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
TTC9Q92623 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TTC9Q92623 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC15.8■□□□□ 0.12
TTC9Q92623 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TTC9Q92623 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
TTC9Q92623 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
TTC9Q92623 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TTC9Q92623 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TTC9Q92623 EGFEM1P-202ENST00000431685 1563 ntBASIC15.8■□□□□ 0.12
TTC9Q92623 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC15.8■□□□□ 0.12
TTC9Q92623 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TTC9Q92623 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TTC9Q92623 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
TTC9Q92623 CU639417.3-201ENST00000624240 1404 ntBASIC15.8■□□□□ 0.12
TTC9Q92623 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TTC9Q92623 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TTC9Q92623 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TTC9Q92623 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TTC9Q92623 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC15.8■□□□□ 0.12
TTC9Q92623 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TTC9Q92623 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TTC9Q92623 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms