Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC21.57■■□□□ 1.04
RAPGEF4Q8WZA2 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
RAPGEF4Q8WZA2 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RAPGEF4Q8WZA2 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC21.57■■□□□ 1.04
RAPGEF4Q8WZA2 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC21.57■■□□□ 1.04
RAPGEF4Q8WZA2 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
RAPGEF4Q8WZA2 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
RAPGEF4Q8WZA2 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC21.56■■□□□ 1.04
RAPGEF4Q8WZA2 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
RAPGEF4Q8WZA2 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC21.56■■□□□ 1.04
RAPGEF4Q8WZA2 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC21.56■■□□□ 1.04
RAPGEF4Q8WZA2 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RAPGEF4Q8WZA2 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC21.56■■□□□ 1.04
RAPGEF4Q8WZA2 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
RAPGEF4Q8WZA2 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RAPGEF4Q8WZA2 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC21.56■■□□□ 1.04
RAPGEF4Q8WZA2 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RAPGEF4Q8WZA2 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC21.56■■□□□ 1.04
RAPGEF4Q8WZA2 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RAPGEF4Q8WZA2 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RAPGEF4Q8WZA2 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC21.56■■□□□ 1.04
RAPGEF4Q8WZA2 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RAPGEF4Q8WZA2 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC21.56■■□□□ 1.04
RAPGEF4Q8WZA2 AC011495.1-201ENST00000498085 584 ntBASIC21.56■■□□□ 1.04
RAPGEF4Q8WZA2 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
RAPGEF4Q8WZA2 HILS1-202ENST00000545329 423 ntBASIC21.56■■□□□ 1.04
RAPGEF4Q8WZA2 AC007431.3-201ENST00000623221 587 ntBASIC21.56■■□□□ 1.04
RAPGEF4Q8WZA2 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
RAPGEF4Q8WZA2 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC21.56■■□□□ 1.04
RAPGEF4Q8WZA2 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
RAPGEF4Q8WZA2 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
RAPGEF4Q8WZA2 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC21.56■■□□□ 1.04
RAPGEF4Q8WZA2 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
RAPGEF4Q8WZA2 AC068880.1-201ENST00000507289 2297 ntBASIC21.55■■□□□ 1.04
RAPGEF4Q8WZA2 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC21.55■■□□□ 1.04
RAPGEF4Q8WZA2 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
RAPGEF4Q8WZA2 AL023806.1-201ENST00000603994 1649 ntBASIC21.55■■□□□ 1.04
RAPGEF4Q8WZA2 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RAPGEF4Q8WZA2 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC21.55■■□□□ 1.04
RAPGEF4Q8WZA2 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
RAPGEF4Q8WZA2 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RAPGEF4Q8WZA2 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RAPGEF4Q8WZA2 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
RAPGEF4Q8WZA2 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RAPGEF4Q8WZA2 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RAPGEF4Q8WZA2 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC21.55■■□□□ 1.04
RAPGEF4Q8WZA2 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC21.55■■□□□ 1.04
RAPGEF4Q8WZA2 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC21.55■■□□□ 1.04
RAPGEF4Q8WZA2 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RAPGEF4Q8WZA2 SDHAP3-202ENST00000515467 728 ntBASIC21.55■■□□□ 1.04
RAPGEF4Q8WZA2 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC21.55■■□□□ 1.04
RAPGEF4Q8WZA2 AC055876.2-201ENST00000531834 546 ntBASIC21.55■■□□□ 1.04
RAPGEF4Q8WZA2 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RAPGEF4Q8WZA2 AC132938.2-201ENST00000579188 680 ntBASIC21.55■■□□□ 1.04
RAPGEF4Q8WZA2 SRD5A3P1-201ENST00000603021 949 ntBASIC21.55■■□□□ 1.04
RAPGEF4Q8WZA2 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC21.55■■□□□ 1.04
RAPGEF4Q8WZA2 AL591163.1-201ENST00000641757 987 ntBASIC21.55■■□□□ 1.04
RAPGEF4Q8WZA2 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
RAPGEF4Q8WZA2 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC21.55■■□□□ 1.04
RAPGEF4Q8WZA2 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RAPGEF4Q8WZA2 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RAPGEF4Q8WZA2 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RAPGEF4Q8WZA2 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RAPGEF4Q8WZA2 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RAPGEF4Q8WZA2 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC21.55■■□□□ 1.04
RAPGEF4Q8WZA2 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RAPGEF4Q8WZA2 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
RAPGEF4Q8WZA2 AL031731.1-201ENST00000642131 2094 ntBASIC21.54■■□□□ 1.04
RAPGEF4Q8WZA2 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RAPGEF4Q8WZA2 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC21.54■■□□□ 1.04
RAPGEF4Q8WZA2 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC21.54■■□□□ 1.04
RAPGEF4Q8WZA2 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
RAPGEF4Q8WZA2 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
RAPGEF4Q8WZA2 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RAPGEF4Q8WZA2 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
RAPGEF4Q8WZA2 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC21.54■■□□□ 1.04
RAPGEF4Q8WZA2 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC21.54■■□□□ 1.04
RAPGEF4Q8WZA2 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
RAPGEF4Q8WZA2 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RAPGEF4Q8WZA2 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC21.54■■□□□ 1.04
RAPGEF4Q8WZA2 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC21.54■■□□□ 1.04
RAPGEF4Q8WZA2 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC21.54■■□□□ 1.04
RAPGEF4Q8WZA2 IFT20-216ENST00000588477 774 ntTSL 5 BASIC21.54■■□□□ 1.04
RAPGEF4Q8WZA2 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC21.54■■□□□ 1.04
RAPGEF4Q8WZA2 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC21.54■■□□□ 1.04
RAPGEF4Q8WZA2 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RAPGEF4Q8WZA2 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RAPGEF4Q8WZA2 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC21.54■■□□□ 1.04
RAPGEF4Q8WZA2 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
RAPGEF4Q8WZA2 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
RAPGEF4Q8WZA2 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RAPGEF4Q8WZA2 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC21.54■■□□□ 1.04
RAPGEF4Q8WZA2 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC21.54■■□□□ 1.04
RAPGEF4Q8WZA2 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RAPGEF4Q8WZA2 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RAPGEF4Q8WZA2 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
RAPGEF4Q8WZA2 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
RAPGEF4Q8WZA2 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
RAPGEF4Q8WZA2 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RAPGEF4Q8WZA2 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms