Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 AC018695.7-201ENST00000624587 2492 ntBASIC17.33■□□□□ 0.36
TRAF3IP1Q8TDR0 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRAF3IP1Q8TDR0 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRAF3IP1Q8TDR0 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
TRAF3IP1Q8TDR0 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TRAF3IP1Q8TDR0 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC17.33■□□□□ 0.36
TRAF3IP1Q8TDR0 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TRAF3IP1Q8TDR0 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TRAF3IP1Q8TDR0 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC17.33■□□□□ 0.36
TRAF3IP1Q8TDR0 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRAF3IP1Q8TDR0 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC17.33■□□□□ 0.36
TRAF3IP1Q8TDR0 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TRAF3IP1Q8TDR0 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRAF3IP1Q8TDR0 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC17.33■□□□□ 0.36
TRAF3IP1Q8TDR0 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRAF3IP1Q8TDR0 SNX33P1-201ENST00000592116 1762 ntBASIC17.33■□□□□ 0.36
TRAF3IP1Q8TDR0 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC17.32■□□□□ 0.36
TRAF3IP1Q8TDR0 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRAF3IP1Q8TDR0 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRAF3IP1Q8TDR0 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRAF3IP1Q8TDR0 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRAF3IP1Q8TDR0 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRAF3IP1Q8TDR0 ME2P1-201ENST00000426028 1970 ntBASIC17.32■□□□□ 0.36
TRAF3IP1Q8TDR0 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRAF3IP1Q8TDR0 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC17.32■□□□□ 0.36
TRAF3IP1Q8TDR0 AC108073.2-201ENST00000464002 357 ntBASIC17.32■□□□□ 0.36
TRAF3IP1Q8TDR0 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC17.32■□□□□ 0.36
TRAF3IP1Q8TDR0 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC17.32■□□□□ 0.36
TRAF3IP1Q8TDR0 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC17.32■□□□□ 0.36
TRAF3IP1Q8TDR0 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC17.32■□□□□ 0.36
TRAF3IP1Q8TDR0 CYB561-216ENST00000582297 897 ntTSL 3 BASIC17.32■□□□□ 0.36
TRAF3IP1Q8TDR0 AC117500.6-201ENST00000624871 588 ntBASIC17.32■□□□□ 0.36
TRAF3IP1Q8TDR0 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC17.32■□□□□ 0.36
TRAF3IP1Q8TDR0 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRAF3IP1Q8TDR0 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRAF3IP1Q8TDR0 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
TRAF3IP1Q8TDR0 NORAD-201ENST00000565493 5339 ntBASIC17.32■□□□□ 0.36
TRAF3IP1Q8TDR0 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC17.32■□□□□ 0.36
TRAF3IP1Q8TDR0 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRAF3IP1Q8TDR0 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
TRAF3IP1Q8TDR0 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRAF3IP1Q8TDR0 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRAF3IP1Q8TDR0 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRAF3IP1Q8TDR0 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRAF3IP1Q8TDR0 AC005052.1-201ENST00000625181 2492 ntBASIC17.31■□□□□ 0.36
TRAF3IP1Q8TDR0 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRAF3IP1Q8TDR0 AC067930.6-201ENST00000623257 4947 ntBASIC17.31■□□□□ 0.36
TRAF3IP1Q8TDR0 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRAF3IP1Q8TDR0 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
TRAF3IP1Q8TDR0 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC17.31■□□□□ 0.36
TRAF3IP1Q8TDR0 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAF3IP1Q8TDR0 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC17.31■□□□□ 0.36
TRAF3IP1Q8TDR0 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRAF3IP1Q8TDR0 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRAF3IP1Q8TDR0 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAF3IP1Q8TDR0 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC17.31■□□□□ 0.36
TRAF3IP1Q8TDR0 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAF3IP1Q8TDR0 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAF3IP1Q8TDR0 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC17.31■□□□□ 0.36
TRAF3IP1Q8TDR0 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
TRAF3IP1Q8TDR0 AL512652.2-201ENST00000625156 1716 ntBASIC17.31■□□□□ 0.36
TRAF3IP1Q8TDR0 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
TRAF3IP1Q8TDR0 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRAF3IP1Q8TDR0 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.31■□□□□ 0.36
TRAF3IP1Q8TDR0 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
TRAF3IP1Q8TDR0 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC17.31■□□□□ 0.36
TRAF3IP1Q8TDR0 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAF3IP1Q8TDR0 AL031284.1-201ENST00000419297 478 ntBASIC17.31■□□□□ 0.36
TRAF3IP1Q8TDR0 AC093909.1-201ENST00000504731 1122 ntBASIC17.31■□□□□ 0.36
TRAF3IP1Q8TDR0 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC17.31■□□□□ 0.36
TRAF3IP1Q8TDR0 AP002469.2-201ENST00000531724 424 ntBASIC17.31■□□□□ 0.36
TRAF3IP1Q8TDR0 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC17.31■□□□□ 0.36
TRAF3IP1Q8TDR0 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC17.31■□□□□ 0.36
TRAF3IP1Q8TDR0 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC17.31■□□□□ 0.36
TRAF3IP1Q8TDR0 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
TRAF3IP1Q8TDR0 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC17.31■□□□□ 0.36
TRAF3IP1Q8TDR0 MIR4751-201ENST00000578027 74 ntBASIC17.31■□□□□ 0.36
TRAF3IP1Q8TDR0 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC17.31■□□□□ 0.36
TRAF3IP1Q8TDR0 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC17.31■□□□□ 0.36
TRAF3IP1Q8TDR0 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC17.31■□□□□ 0.36
TRAF3IP1Q8TDR0 PRKN-208ENST00000610470 531 ntTSL 2 BASIC17.31■□□□□ 0.36
TRAF3IP1Q8TDR0 PRKN-209ENST00000612485 225 ntTSL 5 BASIC17.31■□□□□ 0.36
TRAF3IP1Q8TDR0 AC004790.2-201ENST00000623588 572 ntBASIC17.31■□□□□ 0.36
TRAF3IP1Q8TDR0 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
TRAF3IP1Q8TDR0 CYP2T1P-202ENST00000641596 2535 ntBASIC17.31■□□□□ 0.36
TRAF3IP1Q8TDR0 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAF3IP1Q8TDR0 GGT3P-204ENST00000453783 1664 ntBASIC17.31■□□□□ 0.36
TRAF3IP1Q8TDR0 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRAF3IP1Q8TDR0 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAF3IP1Q8TDR0 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAF3IP1Q8TDR0 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAF3IP1Q8TDR0 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC17.31■□□□□ 0.36
TRAF3IP1Q8TDR0 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
TRAF3IP1Q8TDR0 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.31■□□□□ 0.36
TRAF3IP1Q8TDR0 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAF3IP1Q8TDR0 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAF3IP1Q8TDR0 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC17.31■□□□□ 0.36
TRAF3IP1Q8TDR0 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC17.31■□□□□ 0.36
TRAF3IP1Q8TDR0 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRAF3IP1Q8TDR0 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms