Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
COL22A1Q8NFW1 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC21.66■■□□□ 1.06
COL22A1Q8NFW1 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC21.66■■□□□ 1.06
COL22A1Q8NFW1 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC21.66■■□□□ 1.06
COL22A1Q8NFW1 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
COL22A1Q8NFW1 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
COL22A1Q8NFW1 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
COL22A1Q8NFW1 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
COL22A1Q8NFW1 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
COL22A1Q8NFW1 TARDBPP1-201ENST00000442013 1203 ntBASIC21.66■■□□□ 1.06
COL22A1Q8NFW1 FXR1-221ENST00000491674 365 ntTSL 2 BASIC21.66■■□□□ 1.06
COL22A1Q8NFW1 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC21.66■■□□□ 1.06
COL22A1Q8NFW1 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC21.66■■□□□ 1.06
COL22A1Q8NFW1 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC21.66■■□□□ 1.06
COL22A1Q8NFW1 AP006547.1-201ENST00000563435 692 ntBASIC21.66■■□□□ 1.06
COL22A1Q8NFW1 AC009486.1-201ENST00000569860 813 ntBASIC21.66■■□□□ 1.06
COL22A1Q8NFW1 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC21.66■■□□□ 1.06
COL22A1Q8NFW1 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
COL22A1Q8NFW1 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
COL22A1Q8NFW1 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC21.65■■□□□ 1.06
COL22A1Q8NFW1 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
COL22A1Q8NFW1 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.65■■□□□ 1.06
COL22A1Q8NFW1 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
COL22A1Q8NFW1 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC21.65■■□□□ 1.06
COL22A1Q8NFW1 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
COL22A1Q8NFW1 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
COL22A1Q8NFW1 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
COL22A1Q8NFW1 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
COL22A1Q8NFW1 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
COL22A1Q8NFW1 AC004898.1-201ENST00000451057 766 ntBASIC21.65■■□□□ 1.06
COL22A1Q8NFW1 EIF4HP1-201ENST00000453115 687 ntBASIC21.65■■□□□ 1.06
COL22A1Q8NFW1 UPF3AP2-201ENST00000457924 1132 ntBASIC21.65■■□□□ 1.06
COL22A1Q8NFW1 PFN2-215ENST00000497148 743 ntTSL 4 BASIC21.65■■□□□ 1.06
COL22A1Q8NFW1 HIST2H2BC-201ENST00000498492 580 ntBASIC21.65■■□□□ 1.06
COL22A1Q8NFW1 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC21.65■■□□□ 1.06
COL22A1Q8NFW1 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC21.65■■□□□ 1.06
COL22A1Q8NFW1 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
COL22A1Q8NFW1 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
COL22A1Q8NFW1 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
COL22A1Q8NFW1 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
COL22A1Q8NFW1 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
COL22A1Q8NFW1 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC21.64■■□□□ 1.06
COL22A1Q8NFW1 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.06
COL22A1Q8NFW1 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
COL22A1Q8NFW1 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC21.64■■□□□ 1.05
COL22A1Q8NFW1 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
COL22A1Q8NFW1 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
COL22A1Q8NFW1 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC21.64■■□□□ 1.05
COL22A1Q8NFW1 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
COL22A1Q8NFW1 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC21.64■■□□□ 1.05
COL22A1Q8NFW1 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
COL22A1Q8NFW1 RPS2P36-201ENST00000456516 831 ntBASIC21.64■■□□□ 1.05
COL22A1Q8NFW1 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC21.64■■□□□ 1.05
COL22A1Q8NFW1 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC21.64■■□□□ 1.05
COL22A1Q8NFW1 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC21.64■■□□□ 1.05
COL22A1Q8NFW1 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC21.64■■□□□ 1.05
COL22A1Q8NFW1 RHBDF1P1-201ENST00000427504 1941 ntBASIC21.64■■□□□ 1.05
COL22A1Q8NFW1 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC21.64■■□□□ 1.05
COL22A1Q8NFW1 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
COL22A1Q8NFW1 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC21.64■■□□□ 1.05
COL22A1Q8NFW1 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
COL22A1Q8NFW1 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC21.64■■□□□ 1.05
COL22A1Q8NFW1 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC21.63■■□□□ 1.05
COL22A1Q8NFW1 AC009113.1-201ENST00000570267 2443 ntBASIC21.63■■□□□ 1.05
COL22A1Q8NFW1 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
COL22A1Q8NFW1 RPS3-201ENST00000278572 907 ntTSL 3 BASIC21.63■■□□□ 1.05
COL22A1Q8NFW1 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
COL22A1Q8NFW1 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
COL22A1Q8NFW1 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC21.63■■□□□ 1.05
COL22A1Q8NFW1 VDAC1P7-201ENST00000462417 847 ntBASIC21.63■■□□□ 1.05
COL22A1Q8NFW1 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC21.63■■□□□ 1.05
COL22A1Q8NFW1 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
COL22A1Q8NFW1 ADM-202ENST00000524948 584 ntTSL 2 BASIC21.63■■□□□ 1.05
COL22A1Q8NFW1 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
COL22A1Q8NFW1 AP001063.1-201ENST00000568332 529 ntBASIC21.63■■□□□ 1.05
COL22A1Q8NFW1 MIR4706-201ENST00000582134 82 ntBASIC21.63■■□□□ 1.05
COL22A1Q8NFW1 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
COL22A1Q8NFW1 HCG18-245ENST00000602550 559 ntTSL 4 BASIC21.63■■□□□ 1.05
COL22A1Q8NFW1 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
COL22A1Q8NFW1 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
COL22A1Q8NFW1 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
COL22A1Q8NFW1 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
COL22A1Q8NFW1 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
COL22A1Q8NFW1 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
COL22A1Q8NFW1 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
COL22A1Q8NFW1 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC21.62■■□□□ 1.05
COL22A1Q8NFW1 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
COL22A1Q8NFW1 BRF1-202ENST00000379932 884 ntTSL 5 BASIC21.62■■□□□ 1.05
COL22A1Q8NFW1 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
COL22A1Q8NFW1 AC253536.4-201ENST00000440539 267 ntBASIC21.62■■□□□ 1.05
COL22A1Q8NFW1 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC21.62■■□□□ 1.05
COL22A1Q8NFW1 TMEM198B-204ENST00000484016 896 ntBASIC21.62■■□□□ 1.05
COL22A1Q8NFW1 AC025279.2-201ENST00000569730 653 ntBASIC21.62■■□□□ 1.05
COL22A1Q8NFW1 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC21.62■■□□□ 1.05
COL22A1Q8NFW1 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC21.62■■□□□ 1.05
COL22A1Q8NFW1 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
COL22A1Q8NFW1 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC21.62■■□□□ 1.05
COL22A1Q8NFW1 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
COL22A1Q8NFW1 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
COL22A1Q8NFW1 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC21.62■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms