Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SIMC1Q8NDZ2 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SIMC1Q8NDZ2 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC15.69■□□□□ 0.1
SIMC1Q8NDZ2 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
SIMC1Q8NDZ2 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
SIMC1Q8NDZ2 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SIMC1Q8NDZ2 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SIMC1Q8NDZ2 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SIMC1Q8NDZ2 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SIMC1Q8NDZ2 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SIMC1Q8NDZ2 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SIMC1Q8NDZ2 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SIMC1Q8NDZ2 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC15.68■□□□□ 0.1
SIMC1Q8NDZ2 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
SIMC1Q8NDZ2 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SIMC1Q8NDZ2 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SIMC1Q8NDZ2 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC15.68■□□□□ 0.1
SIMC1Q8NDZ2 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SIMC1Q8NDZ2 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
SIMC1Q8NDZ2 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SIMC1Q8NDZ2 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SIMC1Q8NDZ2 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC15.68■□□□□ 0.1
SIMC1Q8NDZ2 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC15.68■□□□□ 0.1
SIMC1Q8NDZ2 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
SIMC1Q8NDZ2 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SIMC1Q8NDZ2 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SIMC1Q8NDZ2 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
SIMC1Q8NDZ2 TEX30-205ENST00000376029 959 ntTSL 2 BASIC15.68■□□□□ 0.1
SIMC1Q8NDZ2 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
SIMC1Q8NDZ2 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SIMC1Q8NDZ2 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC15.68■□□□□ 0.1
SIMC1Q8NDZ2 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
SIMC1Q8NDZ2 CXCL1P1-201ENST00000502804 216 ntBASIC15.68■□□□□ 0.1
SIMC1Q8NDZ2 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC15.68■□□□□ 0.1
SIMC1Q8NDZ2 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC15.68■□□□□ 0.1
SIMC1Q8NDZ2 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
SIMC1Q8NDZ2 AC013467.2-201ENST00000605472 835 ntBASIC15.68■□□□□ 0.1
SIMC1Q8NDZ2 BSG-214ENST00000614867 960 ntTSL 3 BASIC15.68■□□□□ 0.1
SIMC1Q8NDZ2 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SIMC1Q8NDZ2 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SIMC1Q8NDZ2 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SIMC1Q8NDZ2 WT1-209ENST00000530998 2421 ntTSL 2 BASIC15.68■□□□□ 0.1
SIMC1Q8NDZ2 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SIMC1Q8NDZ2 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SIMC1Q8NDZ2 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SIMC1Q8NDZ2 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SIMC1Q8NDZ2 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SIMC1Q8NDZ2 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SIMC1Q8NDZ2 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC15.68■□□□□ 0.1
SIMC1Q8NDZ2 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SIMC1Q8NDZ2 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC15.68■□□□□ 0.1
SIMC1Q8NDZ2 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC15.68■□□□□ 0.1
SIMC1Q8NDZ2 AC092364.2-201ENST00000596710 2692 ntBASIC15.68■□□□□ 0.1
SIMC1Q8NDZ2 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC15.68■□□□□ 0.1
SIMC1Q8NDZ2 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SIMC1Q8NDZ2 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC15.67■□□□□ 0.1
SIMC1Q8NDZ2 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SIMC1Q8NDZ2 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SIMC1Q8NDZ2 HARS-203ENST00000431330 1774 ntTSL 2 BASIC15.67■□□□□ 0.1
SIMC1Q8NDZ2 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SIMC1Q8NDZ2 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
SIMC1Q8NDZ2 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
SIMC1Q8NDZ2 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
SIMC1Q8NDZ2 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC15.67■□□□□ 0.1
SIMC1Q8NDZ2 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SIMC1Q8NDZ2 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SIMC1Q8NDZ2 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
SIMC1Q8NDZ2 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SIMC1Q8NDZ2 PC-214ENST00000628663 1470 ntTSL 5 BASIC15.67■□□□□ 0.1
SIMC1Q8NDZ2 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SIMC1Q8NDZ2 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
SIMC1Q8NDZ2 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SIMC1Q8NDZ2 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SIMC1Q8NDZ2 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SIMC1Q8NDZ2 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
SIMC1Q8NDZ2 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC15.67■□□□□ 0.1
SIMC1Q8NDZ2 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
SIMC1Q8NDZ2 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC15.67■□□□□ 0.1
SIMC1Q8NDZ2 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC15.67■□□□□ 0.1
SIMC1Q8NDZ2 AC106730.1-201ENST00000566722 1090 ntBASIC15.67■□□□□ 0.1
SIMC1Q8NDZ2 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC15.67■□□□□ 0.1
SIMC1Q8NDZ2 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
SIMC1Q8NDZ2 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC15.67■□□□□ 0.1
SIMC1Q8NDZ2 AC064836.3-201ENST00000607928 673 ntBASIC15.67■□□□□ 0.1
SIMC1Q8NDZ2 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC15.67■□□□□ 0.1
SIMC1Q8NDZ2 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SIMC1Q8NDZ2 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SIMC1Q8NDZ2 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC15.67■□□□□ 0.1
SIMC1Q8NDZ2 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SIMC1Q8NDZ2 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SIMC1Q8NDZ2 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC15.67■□□□□ 0.1
SIMC1Q8NDZ2 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SIMC1Q8NDZ2 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC15.67■□□□□ 0.1
SIMC1Q8NDZ2 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC15.67■□□□□ 0.1
SIMC1Q8NDZ2 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SIMC1Q8NDZ2 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
SIMC1Q8NDZ2 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC15.67■□□□□ 0.1
SIMC1Q8NDZ2 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC15.66■□□□□ 0.1
SIMC1Q8NDZ2 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
SIMC1Q8NDZ2 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms