Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 AC005237.2-201ENST00000434368 219 ntBASIC16.36■□□□□ 0.21
TRAM1L1Q8N609 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC16.36■□□□□ 0.21
TRAM1L1Q8N609 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC16.36■□□□□ 0.21
TRAM1L1Q8N609 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC16.36■□□□□ 0.21
TRAM1L1Q8N609 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
TRAM1L1Q8N609 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAM1L1Q8N609 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC16.36■□□□□ 0.21
TRAM1L1Q8N609 NKG7-205ENST00000600427 520 ntTSL 3 BASIC16.36■□□□□ 0.21
TRAM1L1Q8N609 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC16.36■□□□□ 0.21
TRAM1L1Q8N609 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC16.36■□□□□ 0.21
TRAM1L1Q8N609 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAM1L1Q8N609 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
TRAM1L1Q8N609 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAM1L1Q8N609 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAM1L1Q8N609 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAM1L1Q8N609 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAM1L1Q8N609 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAM1L1Q8N609 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAM1L1Q8N609 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TRAM1L1Q8N609 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.36■□□□□ 0.21
TRAM1L1Q8N609 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TRAM1L1Q8N609 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.35■□□□□ 0.21
TRAM1L1Q8N609 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
TRAM1L1Q8N609 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
TRAM1L1Q8N609 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAM1L1Q8N609 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAM1L1Q8N609 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRAM1L1Q8N609 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
TRAM1L1Q8N609 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC16.35■□□□□ 0.21
TRAM1L1Q8N609 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAM1L1Q8N609 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC16.35■□□□□ 0.21
TRAM1L1Q8N609 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAM1L1Q8N609 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAM1L1Q8N609 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC16.35■□□□□ 0.21
TRAM1L1Q8N609 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRAM1L1Q8N609 MIR346-201ENST00000362234 95 ntBASIC16.35■□□□□ 0.21
TRAM1L1Q8N609 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.35■□□□□ 0.21
TRAM1L1Q8N609 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAM1L1Q8N609 PTMS-202ENST00000389462 773 ntTSL 2 BASIC16.35■□□□□ 0.21
TRAM1L1Q8N609 AL627223.1-201ENST00000416693 442 ntBASIC16.35■□□□□ 0.21
TRAM1L1Q8N609 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
TRAM1L1Q8N609 AC093724.1-201ENST00000448659 1027 ntBASIC16.35■□□□□ 0.21
TRAM1L1Q8N609 POU5F1P6-201ENST00000466990 990 ntBASIC16.35■□□□□ 0.21
TRAM1L1Q8N609 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC16.35■□□□□ 0.21
TRAM1L1Q8N609 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRAM1L1Q8N609 TSFM-210ENST00000550559 897 ntTSL 5 BASIC16.35■□□□□ 0.21
TRAM1L1Q8N609 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC16.35■□□□□ 0.21
TRAM1L1Q8N609 AP000842.3-202ENST00000569238 1080 ntBASIC16.35■□□□□ 0.21
TRAM1L1Q8N609 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC16.35■□□□□ 0.21
TRAM1L1Q8N609 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC16.35■□□□□ 0.21
TRAM1L1Q8N609 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
TRAM1L1Q8N609 AC084121.4-201ENST00000641598 221 ntBASIC16.35■□□□□ 0.21
TRAM1L1Q8N609 AF228730.8-201ENST00000642140 221 ntBASIC16.35■□□□□ 0.21
TRAM1L1Q8N609 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.35■□□□□ 0.21
TRAM1L1Q8N609 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
TRAM1L1Q8N609 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
TRAM1L1Q8N609 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAM1L1Q8N609 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
TRAM1L1Q8N609 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAM1L1Q8N609 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRAM1L1Q8N609 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAM1L1Q8N609 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
TRAM1L1Q8N609 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC16.35■□□□□ 0.21
TRAM1L1Q8N609 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
TRAM1L1Q8N609 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.35■□□□□ 0.21
TRAM1L1Q8N609 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
TRAM1L1Q8N609 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRAM1L1Q8N609 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC16.34■□□□□ 0.21
TRAM1L1Q8N609 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.34■□□□□ 0.21
TRAM1L1Q8N609 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRAM1L1Q8N609 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAM1L1Q8N609 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.34■□□□□ 0.21
TRAM1L1Q8N609 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC16.34■□□□□ 0.21
TRAM1L1Q8N609 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRAM1L1Q8N609 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.34■□□□□ 0.21
TRAM1L1Q8N609 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAM1L1Q8N609 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRAM1L1Q8N609 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRAM1L1Q8N609 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRAM1L1Q8N609 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAM1L1Q8N609 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAM1L1Q8N609 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRAM1L1Q8N609 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRAM1L1Q8N609 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC16.34■□□□□ 0.21
TRAM1L1Q8N609 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC16.34■□□□□ 0.21
TRAM1L1Q8N609 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC16.34■□□□□ 0.21
TRAM1L1Q8N609 URGCP-206ENST00000446958 365 ntTSL 2 BASIC16.34■□□□□ 0.21
TRAM1L1Q8N609 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC16.34■□□□□ 0.21
TRAM1L1Q8N609 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC16.34■□□□□ 0.21
TRAM1L1Q8N609 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC16.34■□□□□ 0.21
TRAM1L1Q8N609 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC16.34■□□□□ 0.21
TRAM1L1Q8N609 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC16.34■□□□□ 0.21
TRAM1L1Q8N609 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC16.34■□□□□ 0.21
TRAM1L1Q8N609 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC16.34■□□□□ 0.21
TRAM1L1Q8N609 SSH2-211ENST00000590153 570 ntTSL 4 BASIC16.34■□□□□ 0.21
TRAM1L1Q8N609 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC16.34■□□□□ 0.21
TRAM1L1Q8N609 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC16.34■□□□□ 0.21
TRAM1L1Q8N609 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAM1L1Q8N609 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.34■□□□□ 0.21
TRAM1L1Q8N609 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms