Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RFX6Q8HWS3 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RFX6Q8HWS3 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RFX6Q8HWS3 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
RFX6Q8HWS3 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RFX6Q8HWS3 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
RFX6Q8HWS3 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RFX6Q8HWS3 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC17.29■□□□□ 0.36
RFX6Q8HWS3 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC17.29■□□□□ 0.36
RFX6Q8HWS3 FAAHP1-202ENST00000446499 1238 ntBASIC17.29■□□□□ 0.36
RFX6Q8HWS3 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RFX6Q8HWS3 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
RFX6Q8HWS3 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC17.29■□□□□ 0.36
RFX6Q8HWS3 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC17.29■□□□□ 0.36
RFX6Q8HWS3 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC17.29■□□□□ 0.36
RFX6Q8HWS3 AL049840.3-201ENST00000602669 611 ntBASIC17.29■□□□□ 0.36
RFX6Q8HWS3 AL773604.1-201ENST00000617417 272 ntBASIC17.29■□□□□ 0.36
RFX6Q8HWS3 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RFX6Q8HWS3 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
RFX6Q8HWS3 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RFX6Q8HWS3 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
RFX6Q8HWS3 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RFX6Q8HWS3 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
RFX6Q8HWS3 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RFX6Q8HWS3 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
RFX6Q8HWS3 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC17.29■□□□□ 0.36
RFX6Q8HWS3 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RFX6Q8HWS3 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RFX6Q8HWS3 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
RFX6Q8HWS3 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RFX6Q8HWS3 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RFX6Q8HWS3 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
RFX6Q8HWS3 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RFX6Q8HWS3 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
RFX6Q8HWS3 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RFX6Q8HWS3 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
RFX6Q8HWS3 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RFX6Q8HWS3 LINC02199-201ENST00000506655 2702 ntBASIC17.28■□□□□ 0.36
RFX6Q8HWS3 AL513523.2-202ENST00000427283 2040 ntBASIC17.28■□□□□ 0.36
RFX6Q8HWS3 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RFX6Q8HWS3 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC17.28■□□□□ 0.36
RFX6Q8HWS3 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RFX6Q8HWS3 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RFX6Q8HWS3 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC17.28■□□□□ 0.36
RFX6Q8HWS3 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RFX6Q8HWS3 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RFX6Q8HWS3 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RFX6Q8HWS3 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RFX6Q8HWS3 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RFX6Q8HWS3 STARD13-205ENST00000439831 945 ntTSL 2 BASIC17.28■□□□□ 0.36
RFX6Q8HWS3 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC17.28■□□□□ 0.36
RFX6Q8HWS3 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC17.28■□□□□ 0.36
RFX6Q8HWS3 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC17.28■□□□□ 0.36
RFX6Q8HWS3 AP002469.2-201ENST00000531724 424 ntBASIC17.28■□□□□ 0.36
RFX6Q8HWS3 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
RFX6Q8HWS3 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC17.28■□□□□ 0.36
RFX6Q8HWS3 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC17.28■□□□□ 0.36
RFX6Q8HWS3 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC17.28■□□□□ 0.36
RFX6Q8HWS3 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC17.28■□□□□ 0.36
RFX6Q8HWS3 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
RFX6Q8HWS3 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RFX6Q8HWS3 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC17.28■□□□□ 0.36
RFX6Q8HWS3 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RFX6Q8HWS3 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RFX6Q8HWS3 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RFX6Q8HWS3 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
RFX6Q8HWS3 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC17.28■□□□□ 0.36
RFX6Q8HWS3 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC17.28■□□□□ 0.36
RFX6Q8HWS3 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC17.28■□□□□ 0.36
RFX6Q8HWS3 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
RFX6Q8HWS3 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC17.28■□□□□ 0.36
RFX6Q8HWS3 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
RFX6Q8HWS3 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RFX6Q8HWS3 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
RFX6Q8HWS3 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
RFX6Q8HWS3 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RFX6Q8HWS3 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RFX6Q8HWS3 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC17.28■□□□□ 0.36
RFX6Q8HWS3 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RFX6Q8HWS3 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RFX6Q8HWS3 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC17.28■□□□□ 0.36
RFX6Q8HWS3 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RFX6Q8HWS3 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RFX6Q8HWS3 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
RFX6Q8HWS3 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC17.27■□□□□ 0.36
RFX6Q8HWS3 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
RFX6Q8HWS3 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RFX6Q8HWS3 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RFX6Q8HWS3 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
RFX6Q8HWS3 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RFX6Q8HWS3 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RFX6Q8HWS3 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
RFX6Q8HWS3 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RFX6Q8HWS3 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RFX6Q8HWS3 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RFX6Q8HWS3 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC17.27■□□□□ 0.36
RFX6Q8HWS3 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RFX6Q8HWS3 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RFX6Q8HWS3 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RFX6Q8HWS3 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms