Protein–RNA interactions for Protein: Q7Z5N4

SDK1, Protein sidekick-1, humanhuman

Predictions only

Length 2,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDK1Q7Z5N4 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SDK1Q7Z5N4 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC16.4■□□□□ 0.22
SDK1Q7Z5N4 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC16.4■□□□□ 0.22
SDK1Q7Z5N4 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SDK1Q7Z5N4 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SDK1Q7Z5N4 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SDK1Q7Z5N4 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
SDK1Q7Z5N4 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
SDK1Q7Z5N4 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.4■□□□□ 0.22
SDK1Q7Z5N4 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
SDK1Q7Z5N4 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SDK1Q7Z5N4 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SDK1Q7Z5N4 AL138781.2-201ENST00000617896 1843 ntBASIC16.4■□□□□ 0.22
SDK1Q7Z5N4 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SDK1Q7Z5N4 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
SDK1Q7Z5N4 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SDK1Q7Z5N4 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SDK1Q7Z5N4 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SDK1Q7Z5N4 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
SDK1Q7Z5N4 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC16.39■□□□□ 0.22
SDK1Q7Z5N4 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC16.39■□□□□ 0.22
SDK1Q7Z5N4 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC16.39■□□□□ 0.22
SDK1Q7Z5N4 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC16.39■□□□□ 0.22
SDK1Q7Z5N4 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC16.39■□□□□ 0.22
SDK1Q7Z5N4 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.22
SDK1Q7Z5N4 5S_rRNA.22-201ENST00000614916 106 ntBASIC16.39■□□□□ 0.22
SDK1Q7Z5N4 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16.39■□□□□ 0.21
SDK1Q7Z5N4 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SDK1Q7Z5N4 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC16.39■□□□□ 0.21
SDK1Q7Z5N4 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC16.39■□□□□ 0.21
SDK1Q7Z5N4 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SDK1Q7Z5N4 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SDK1Q7Z5N4 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC16.39■□□□□ 0.21
SDK1Q7Z5N4 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC16.39■□□□□ 0.21
SDK1Q7Z5N4 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SDK1Q7Z5N4 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
SDK1Q7Z5N4 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SDK1Q7Z5N4 BICD1-207ENST00000551848 1962 ntBASIC16.39■□□□□ 0.21
SDK1Q7Z5N4 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SDK1Q7Z5N4 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC16.39■□□□□ 0.21
SDK1Q7Z5N4 PKD1P1-201ENST00000458669 6805 ntBASIC16.39■□□□□ 0.21
SDK1Q7Z5N4 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SDK1Q7Z5N4 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
SDK1Q7Z5N4 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SDK1Q7Z5N4 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
SDK1Q7Z5N4 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SDK1Q7Z5N4 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SDK1Q7Z5N4 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC16.39■□□□□ 0.21
SDK1Q7Z5N4 TTTY23B-201ENST00000442790 549 ntBASIC16.39■□□□□ 0.21
SDK1Q7Z5N4 RN7SL752P-201ENST00000463779 287 ntBASIC16.39■□□□□ 0.21
SDK1Q7Z5N4 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
SDK1Q7Z5N4 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SDK1Q7Z5N4 AC008735.3-201ENST00000596646 500 ntBASIC16.39■□□□□ 0.21
SDK1Q7Z5N4 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC16.39■□□□□ 0.21
SDK1Q7Z5N4 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SDK1Q7Z5N4 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SDK1Q7Z5N4 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SDK1Q7Z5N4 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC16.39■□□□□ 0.21
SDK1Q7Z5N4 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.39■□□□□ 0.21
SDK1Q7Z5N4 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SDK1Q7Z5N4 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SDK1Q7Z5N4 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SDK1Q7Z5N4 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
SDK1Q7Z5N4 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC16.38■□□□□ 0.21
SDK1Q7Z5N4 MPV17-208ENST00000405076 603 ntTSL 5 BASIC16.38■□□□□ 0.21
SDK1Q7Z5N4 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SDK1Q7Z5N4 RN7SL618P-201ENST00000477850 296 ntBASIC16.38■□□□□ 0.21
SDK1Q7Z5N4 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
SDK1Q7Z5N4 USB1-203ENST00000539737 1212 ntTSL 2 BASIC16.38■□□□□ 0.21
SDK1Q7Z5N4 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SDK1Q7Z5N4 AP005482.1-201ENST00000563722 1273 ntBASIC16.38■□□□□ 0.21
SDK1Q7Z5N4 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC16.38■□□□□ 0.21
SDK1Q7Z5N4 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
SDK1Q7Z5N4 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC16.38■□□□□ 0.21
SDK1Q7Z5N4 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SDK1Q7Z5N4 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC16.38■□□□□ 0.21
SDK1Q7Z5N4 AL021920.2-201ENST00000624828 1351 ntBASIC16.38■□□□□ 0.21
SDK1Q7Z5N4 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.38■□□□□ 0.21
SDK1Q7Z5N4 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC16.38■□□□□ 0.21
SDK1Q7Z5N4 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC16.38■□□□□ 0.21
SDK1Q7Z5N4 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
SDK1Q7Z5N4 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SDK1Q7Z5N4 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SDK1Q7Z5N4 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
SDK1Q7Z5N4 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SDK1Q7Z5N4 FUZ-207ENST00000526575 482 ntTSL 4 BASIC16.38■□□□□ 0.21
SDK1Q7Z5N4 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC16.38■□□□□ 0.21
SDK1Q7Z5N4 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC16.38■□□□□ 0.21
SDK1Q7Z5N4 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC16.38■□□□□ 0.21
SDK1Q7Z5N4 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC16.38■□□□□ 0.21
SDK1Q7Z5N4 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC16.38■□□□□ 0.21
SDK1Q7Z5N4 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC16.38■□□□□ 0.21
SDK1Q7Z5N4 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.38■□□□□ 0.21
SDK1Q7Z5N4 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
SDK1Q7Z5N4 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SDK1Q7Z5N4 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SDK1Q7Z5N4 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SDK1Q7Z5N4 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SDK1Q7Z5N4 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SDK1Q7Z5N4 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms