Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
C11orf88Q6PI97 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
C11orf88Q6PI97 AC004870.1-201ENST00000315132 882 ntBASIC14.55□□□□□ -0.08
C11orf88Q6PI97 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC14.55□□□□□ -0.08
C11orf88Q6PI97 AC026396.1-201ENST00000419388 421 ntBASIC14.55□□□□□ -0.08
C11orf88Q6PI97 DRAXINP1-201ENST00000437611 948 ntBASIC14.55□□□□□ -0.08
C11orf88Q6PI97 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC14.55□□□□□ -0.08
C11orf88Q6PI97 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC14.55□□□□□ -0.08
C11orf88Q6PI97 AP003733.1-201ENST00000491725 852 ntBASIC14.55□□□□□ -0.08
C11orf88Q6PI97 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC14.55□□□□□ -0.08
C11orf88Q6PI97 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC14.55□□□□□ -0.08
C11orf88Q6PI97 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC14.55□□□□□ -0.08
C11orf88Q6PI97 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
C11orf88Q6PI97 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC14.55□□□□□ -0.08
C11orf88Q6PI97 AC024563.2-201ENST00000603282 481 ntBASIC14.55□□□□□ -0.08
C11orf88Q6PI97 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
C11orf88Q6PI97 AL121772.3-201ENST00000610840 674 ntBASIC14.55□□□□□ -0.08
C11orf88Q6PI97 KRT18P1-202ENST00000452408 1331 ntBASIC14.55□□□□□ -0.08
C11orf88Q6PI97 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC14.55□□□□□ -0.08
C11orf88Q6PI97 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC14.55□□□□□ -0.08
C11orf88Q6PI97 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
C11orf88Q6PI97 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
C11orf88Q6PI97 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
C11orf88Q6PI97 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
C11orf88Q6PI97 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
C11orf88Q6PI97 KRT89P-201ENST00000620027 1478 ntBASIC14.55□□□□□ -0.08
C11orf88Q6PI97 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
C11orf88Q6PI97 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC14.55□□□□□ -0.08
C11orf88Q6PI97 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
C11orf88Q6PI97 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
C11orf88Q6PI97 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
C11orf88Q6PI97 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC14.55□□□□□ -0.08
C11orf88Q6PI97 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
C11orf88Q6PI97 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC14.55□□□□□ -0.08
C11orf88Q6PI97 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
C11orf88Q6PI97 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
C11orf88Q6PI97 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
C11orf88Q6PI97 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
C11orf88Q6PI97 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
C11orf88Q6PI97 AL365203.3-201ENST00000609742 2057 ntBASIC14.54□□□□□ -0.08
C11orf88Q6PI97 AC104640.1-201ENST00000562617 2109 ntBASIC14.54□□□□□ -0.08
C11orf88Q6PI97 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
C11orf88Q6PI97 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
C11orf88Q6PI97 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
C11orf88Q6PI97 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC14.54□□□□□ -0.08
C11orf88Q6PI97 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
C11orf88Q6PI97 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
C11orf88Q6PI97 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
C11orf88Q6PI97 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
C11orf88Q6PI97 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
C11orf88Q6PI97 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
C11orf88Q6PI97 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC14.54□□□□□ -0.08
C11orf88Q6PI97 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
C11orf88Q6PI97 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
C11orf88Q6PI97 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
C11orf88Q6PI97 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
C11orf88Q6PI97 VENTXP7-201ENST00000475503 772 ntBASIC14.54□□□□□ -0.08
C11orf88Q6PI97 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC14.54□□□□□ -0.08
C11orf88Q6PI97 AP002414.4-201ENST00000589764 1148 ntBASIC14.54□□□□□ -0.08
C11orf88Q6PI97 AL139327.4-201ENST00000612362 153 ntBASIC14.54□□□□□ -0.08
C11orf88Q6PI97 VPS72-207ENST00000640458 689 ntTSL 5 BASIC14.54□□□□□ -0.08
C11orf88Q6PI97 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC14.54□□□□□ -0.08
C11orf88Q6PI97 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
C11orf88Q6PI97 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
C11orf88Q6PI97 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
C11orf88Q6PI97 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
C11orf88Q6PI97 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
C11orf88Q6PI97 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
C11orf88Q6PI97 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
C11orf88Q6PI97 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC14.54□□□□□ -0.08
C11orf88Q6PI97 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
C11orf88Q6PI97 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC14.54□□□□□ -0.08
C11orf88Q6PI97 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
C11orf88Q6PI97 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
C11orf88Q6PI97 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
C11orf88Q6PI97 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
C11orf88Q6PI97 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
C11orf88Q6PI97 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
C11orf88Q6PI97 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
C11orf88Q6PI97 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
C11orf88Q6PI97 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
C11orf88Q6PI97 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
C11orf88Q6PI97 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
C11orf88Q6PI97 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
C11orf88Q6PI97 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
C11orf88Q6PI97 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
C11orf88Q6PI97 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
C11orf88Q6PI97 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
C11orf88Q6PI97 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
C11orf88Q6PI97 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
C11orf88Q6PI97 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
C11orf88Q6PI97 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
C11orf88Q6PI97 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC14.53□□□□□ -0.08
C11orf88Q6PI97 AC093525.9-201ENST00000624961 1746 ntBASIC14.53□□□□□ -0.08
C11orf88Q6PI97 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC14.53□□□□□ -0.08
C11orf88Q6PI97 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
C11orf88Q6PI97 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
C11orf88Q6PI97 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
C11orf88Q6PI97 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
C11orf88Q6PI97 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms