Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
RFWD3Q6PCD5 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RFWD3Q6PCD5 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RFWD3Q6PCD5 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RFWD3Q6PCD5 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC17.31■□□□□ 0.36
RFWD3Q6PCD5 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RFWD3Q6PCD5 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
RFWD3Q6PCD5 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RFWD3Q6PCD5 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RFWD3Q6PCD5 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
RFWD3Q6PCD5 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
RFWD3Q6PCD5 RNU1-129P-201ENST00000384064 167 ntBASIC17.31■□□□□ 0.36
RFWD3Q6PCD5 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
RFWD3Q6PCD5 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC17.31■□□□□ 0.36
RFWD3Q6PCD5 ACTG1P14-201ENST00000446382 1122 ntBASIC17.31■□□□□ 0.36
RFWD3Q6PCD5 AC092183.1-201ENST00000469884 875 ntBASIC17.31■□□□□ 0.36
RFWD3Q6PCD5 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
RFWD3Q6PCD5 MTRF1LP2-201ENST00000506027 1122 ntBASIC17.31■□□□□ 0.36
RFWD3Q6PCD5 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC17.31■□□□□ 0.36
RFWD3Q6PCD5 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC17.31■□□□□ 0.36
RFWD3Q6PCD5 U1.21-201ENST00000580816 167 ntBASIC17.31■□□□□ 0.36
RFWD3Q6PCD5 AL009183.1-201ENST00000603760 355 ntBASIC17.31■□□□□ 0.36
RFWD3Q6PCD5 AP001350.2-201ENST00000625104 1094 ntBASIC17.31■□□□□ 0.36
RFWD3Q6PCD5 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC17.31■□□□□ 0.36
RFWD3Q6PCD5 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC17.31■□□□□ 0.36
RFWD3Q6PCD5 AC079781.4-201ENST00000641908 219 ntBASIC17.31■□□□□ 0.36
RFWD3Q6PCD5 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RFWD3Q6PCD5 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RFWD3Q6PCD5 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RFWD3Q6PCD5 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC17.31■□□□□ 0.36
RFWD3Q6PCD5 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RFWD3Q6PCD5 AL671710.1-201ENST00000610245 2349 ntBASIC17.31■□□□□ 0.36
RFWD3Q6PCD5 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RFWD3Q6PCD5 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RFWD3Q6PCD5 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
RFWD3Q6PCD5 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RFWD3Q6PCD5 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
RFWD3Q6PCD5 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
RFWD3Q6PCD5 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
RFWD3Q6PCD5 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RFWD3Q6PCD5 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
RFWD3Q6PCD5 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RFWD3Q6PCD5 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC17.3■□□□□ 0.36
RFWD3Q6PCD5 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
RFWD3Q6PCD5 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RFWD3Q6PCD5 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC17.3■□□□□ 0.36
RFWD3Q6PCD5 AC005915.1-201ENST00000624912 2018 ntBASIC17.3■□□□□ 0.36
RFWD3Q6PCD5 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.3■□□□□ 0.36
RFWD3Q6PCD5 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RFWD3Q6PCD5 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RFWD3Q6PCD5 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.3■□□□□ 0.36
RFWD3Q6PCD5 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RFWD3Q6PCD5 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RFWD3Q6PCD5 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
RFWD3Q6PCD5 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
RFWD3Q6PCD5 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RFWD3Q6PCD5 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RFWD3Q6PCD5 CDK2AP2P3-201ENST00000422476 372 ntBASIC17.3■□□□□ 0.36
RFWD3Q6PCD5 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC17.3■□□□□ 0.36
RFWD3Q6PCD5 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.3■□□□□ 0.36
RFWD3Q6PCD5 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC17.3■□□□□ 0.36
RFWD3Q6PCD5 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC17.3■□□□□ 0.36
RFWD3Q6PCD5 SNHG9-202ENST00000564014 471 ntBASIC17.3■□□□□ 0.36
RFWD3Q6PCD5 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RFWD3Q6PCD5 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC17.3■□□□□ 0.36
RFWD3Q6PCD5 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC17.3■□□□□ 0.36
RFWD3Q6PCD5 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RFWD3Q6PCD5 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC17.3■□□□□ 0.36
RFWD3Q6PCD5 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC17.3■□□□□ 0.36
RFWD3Q6PCD5 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
RFWD3Q6PCD5 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC17.3■□□□□ 0.36
RFWD3Q6PCD5 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RFWD3Q6PCD5 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RFWD3Q6PCD5 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC17.3■□□□□ 0.36
RFWD3Q6PCD5 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RFWD3Q6PCD5 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
RFWD3Q6PCD5 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
RFWD3Q6PCD5 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RFWD3Q6PCD5 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
RFWD3Q6PCD5 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RFWD3Q6PCD5 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
RFWD3Q6PCD5 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RFWD3Q6PCD5 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RFWD3Q6PCD5 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
RFWD3Q6PCD5 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RFWD3Q6PCD5 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RFWD3Q6PCD5 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RFWD3Q6PCD5 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC17.29■□□□□ 0.36
RFWD3Q6PCD5 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
RFWD3Q6PCD5 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RFWD3Q6PCD5 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RFWD3Q6PCD5 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RFWD3Q6PCD5 AL355306.1-201ENST00000415580 579 ntBASIC17.29■□□□□ 0.36
RFWD3Q6PCD5 AL671277.1-201ENST00000429656 993 ntBASIC17.29■□□□□ 0.36
RFWD3Q6PCD5 ADH5P3-201ENST00000433842 1137 ntBASIC17.29■□□□□ 0.36
RFWD3Q6PCD5 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
RFWD3Q6PCD5 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
RFWD3Q6PCD5 CCND1-203ENST00000536559 553 ntTSL 3 BASIC17.29■□□□□ 0.36
RFWD3Q6PCD5 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC17.29■□□□□ 0.36
RFWD3Q6PCD5 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms