Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NIPAL3Q6P499 KRT8P49-201ENST00000604166 1432 ntBASIC15.16■□□□□ 0.02
NIPAL3Q6P499 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NIPAL3Q6P499 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NIPAL3Q6P499 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC15.16■□□□□ 0.02
NIPAL3Q6P499 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC15.16■□□□□ 0.02
NIPAL3Q6P499 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
NIPAL3Q6P499 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
NIPAL3Q6P499 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NIPAL3Q6P499 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NIPAL3Q6P499 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
NIPAL3Q6P499 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC15.15■□□□□ 0.02
NIPAL3Q6P499 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
NIPAL3Q6P499 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC15.15■□□□□ 0.02
NIPAL3Q6P499 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
NIPAL3Q6P499 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC15.15■□□□□ 0.02
NIPAL3Q6P499 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
NIPAL3Q6P499 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NIPAL3Q6P499 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
NIPAL3Q6P499 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NIPAL3Q6P499 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NIPAL3Q6P499 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NIPAL3Q6P499 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC15.15■□□□□ 0.02
NIPAL3Q6P499 AC026396.1-201ENST00000419388 421 ntBASIC15.15■□□□□ 0.02
NIPAL3Q6P499 RNA5SP419-201ENST00000515908 135 ntBASIC15.15■□□□□ 0.02
NIPAL3Q6P499 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NIPAL3Q6P499 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
NIPAL3Q6P499 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC15.15■□□□□ 0.02
NIPAL3Q6P499 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC15.15■□□□□ 0.02
NIPAL3Q6P499 LITAF-211ENST00000572255 516 ntTSL 4 BASIC15.15■□□□□ 0.02
NIPAL3Q6P499 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
NIPAL3Q6P499 TERC-201ENST00000602385 541 ntBASIC15.15■□□□□ 0.02
NIPAL3Q6P499 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC15.15■□□□□ 0.02
NIPAL3Q6P499 AC116407.3-201ENST00000623905 1129 ntBASIC15.15■□□□□ 0.02
NIPAL3Q6P499 AC117500.6-201ENST00000624871 588 ntBASIC15.15■□□□□ 0.02
NIPAL3Q6P499 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NIPAL3Q6P499 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
NIPAL3Q6P499 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NIPAL3Q6P499 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
NIPAL3Q6P499 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC15.15■□□□□ 0.02
NIPAL3Q6P499 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
NIPAL3Q6P499 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NIPAL3Q6P499 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NIPAL3Q6P499 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC15.15■□□□□ 0.02
NIPAL3Q6P499 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NIPAL3Q6P499 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC15.15■□□□□ 0.02
NIPAL3Q6P499 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
NIPAL3Q6P499 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC15.15■□□□□ 0.02
NIPAL3Q6P499 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
NIPAL3Q6P499 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NIPAL3Q6P499 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
NIPAL3Q6P499 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NIPAL3Q6P499 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
NIPAL3Q6P499 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NIPAL3Q6P499 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NIPAL3Q6P499 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NIPAL3Q6P499 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NIPAL3Q6P499 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
NIPAL3Q6P499 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
NIPAL3Q6P499 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
NIPAL3Q6P499 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NIPAL3Q6P499 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NIPAL3Q6P499 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NIPAL3Q6P499 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
NIPAL3Q6P499 AC098831.1-202ENST00000438821 336 ntBASIC15.14■□□□□ 0.01
NIPAL3Q6P499 AC013467.2-201ENST00000605472 835 ntBASIC15.14■□□□□ 0.01
NIPAL3Q6P499 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NIPAL3Q6P499 GGTLC5P-201ENST00000617623 998 ntBASIC15.14■□□□□ 0.01
NIPAL3Q6P499 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC15.14■□□□□ 0.01
NIPAL3Q6P499 AL139011.1-202ENST00000642063 584 ntBASIC15.14■□□□□ 0.01
NIPAL3Q6P499 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
NIPAL3Q6P499 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.14■□□□□ 0.01
NIPAL3Q6P499 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
NIPAL3Q6P499 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NIPAL3Q6P499 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
NIPAL3Q6P499 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
NIPAL3Q6P499 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
NIPAL3Q6P499 AC105917.1-201ENST00000506637 2539 ntBASIC15.14■□□□□ 0.01
NIPAL3Q6P499 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
NIPAL3Q6P499 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NIPAL3Q6P499 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC15.14■□□□□ 0.01
NIPAL3Q6P499 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NIPAL3Q6P499 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NIPAL3Q6P499 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NIPAL3Q6P499 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NIPAL3Q6P499 ACE-204ENST00000428043 5120 ntTSL 2 BASIC15.14■□□□□ 0.01
NIPAL3Q6P499 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC15.14■□□□□ 0.01
NIPAL3Q6P499 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NIPAL3Q6P499 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NIPAL3Q6P499 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NIPAL3Q6P499 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NIPAL3Q6P499 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
NIPAL3Q6P499 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NIPAL3Q6P499 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NIPAL3Q6P499 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC15.13■□□□□ 0.01
NIPAL3Q6P499 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NIPAL3Q6P499 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NIPAL3Q6P499 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NIPAL3Q6P499 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC15.13■□□□□ 0.01
NIPAL3Q6P499 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms