Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PPP4R4Q6NUP7 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PPP4R4Q6NUP7 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PPP4R4Q6NUP7 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC15.98■□□□□ 0.15
PPP4R4Q6NUP7 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC15.98■□□□□ 0.15
PPP4R4Q6NUP7 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PPP4R4Q6NUP7 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
PPP4R4Q6NUP7 HLA-DQB2-231ENST00000435145 2026 ntBASIC15.98■□□□□ 0.15
PPP4R4Q6NUP7 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PPP4R4Q6NUP7 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC15.98■□□□□ 0.15
PPP4R4Q6NUP7 KRT18P31-201ENST00000506277 1292 ntBASIC15.98■□□□□ 0.15
PPP4R4Q6NUP7 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC15.98■□□□□ 0.15
PPP4R4Q6NUP7 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC15.98■□□□□ 0.15
PPP4R4Q6NUP7 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC15.98■□□□□ 0.15
PPP4R4Q6NUP7 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PPP4R4Q6NUP7 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
PPP4R4Q6NUP7 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC15.98■□□□□ 0.15
PPP4R4Q6NUP7 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PPP4R4Q6NUP7 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC15.98■□□□□ 0.15
PPP4R4Q6NUP7 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PPP4R4Q6NUP7 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC15.98■□□□□ 0.15
PPP4R4Q6NUP7 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC15.98■□□□□ 0.15
PPP4R4Q6NUP7 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PPP4R4Q6NUP7 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
PPP4R4Q6NUP7 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC15.98■□□□□ 0.15
PPP4R4Q6NUP7 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PPP4R4Q6NUP7 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC15.98■□□□□ 0.15
PPP4R4Q6NUP7 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PPP4R4Q6NUP7 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC15.98■□□□□ 0.15
PPP4R4Q6NUP7 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PPP4R4Q6NUP7 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC15.98■□□□□ 0.15
PPP4R4Q6NUP7 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.97■□□□□ 0.15
PPP4R4Q6NUP7 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PPP4R4Q6NUP7 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
PPP4R4Q6NUP7 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PPP4R4Q6NUP7 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
PPP4R4Q6NUP7 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PPP4R4Q6NUP7 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PPP4R4Q6NUP7 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
PPP4R4Q6NUP7 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
PPP4R4Q6NUP7 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PPP4R4Q6NUP7 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PPP4R4Q6NUP7 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC15.97■□□□□ 0.15
PPP4R4Q6NUP7 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC15.97■□□□□ 0.15
PPP4R4Q6NUP7 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
PPP4R4Q6NUP7 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
PPP4R4Q6NUP7 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC15.97■□□□□ 0.15
PPP4R4Q6NUP7 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
PPP4R4Q6NUP7 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PPP4R4Q6NUP7 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PPP4R4Q6NUP7 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
PPP4R4Q6NUP7 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
PPP4R4Q6NUP7 MYCLP1-201ENST00000372451 1075 ntBASIC15.97■□□□□ 0.15
PPP4R4Q6NUP7 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PPP4R4Q6NUP7 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC15.97■□□□□ 0.15
PPP4R4Q6NUP7 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC15.97■□□□□ 0.15
PPP4R4Q6NUP7 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC15.97■□□□□ 0.15
PPP4R4Q6NUP7 TPM1-218ENST00000559281 851 ntTSL 5 BASIC15.97■□□□□ 0.15
PPP4R4Q6NUP7 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC15.97■□□□□ 0.15
PPP4R4Q6NUP7 AL591684.3-201ENST00000605187 298 ntBASIC15.97■□□□□ 0.15
PPP4R4Q6NUP7 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC15.97■□□□□ 0.15
PPP4R4Q6NUP7 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC15.97■□□□□ 0.15
PPP4R4Q6NUP7 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
PPP4R4Q6NUP7 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC15.97■□□□□ 0.15
PPP4R4Q6NUP7 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC15.97■□□□□ 0.15
PPP4R4Q6NUP7 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
PPP4R4Q6NUP7 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PPP4R4Q6NUP7 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PPP4R4Q6NUP7 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC15.97■□□□□ 0.15
PPP4R4Q6NUP7 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC15.97■□□□□ 0.15
PPP4R4Q6NUP7 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC15.97■□□□□ 0.15
PPP4R4Q6NUP7 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.97■□□□□ 0.15
PPP4R4Q6NUP7 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
PPP4R4Q6NUP7 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PPP4R4Q6NUP7 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC15.97■□□□□ 0.15
PPP4R4Q6NUP7 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
PPP4R4Q6NUP7 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
PPP4R4Q6NUP7 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
PPP4R4Q6NUP7 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
PPP4R4Q6NUP7 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PPP4R4Q6NUP7 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PPP4R4Q6NUP7 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC15.96■□□□□ 0.15
PPP4R4Q6NUP7 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC15.96■□□□□ 0.15
PPP4R4Q6NUP7 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PPP4R4Q6NUP7 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
PPP4R4Q6NUP7 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
PPP4R4Q6NUP7 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
PPP4R4Q6NUP7 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC15.96■□□□□ 0.15
PPP4R4Q6NUP7 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
PPP4R4Q6NUP7 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PPP4R4Q6NUP7 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
PPP4R4Q6NUP7 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PPP4R4Q6NUP7 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC15.96■□□□□ 0.15
PPP4R4Q6NUP7 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PPP4R4Q6NUP7 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
PPP4R4Q6NUP7 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.15
PPP4R4Q6NUP7 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PPP4R4Q6NUP7 DFFB-203ENST00000341385 572 ntTSL 5 BASIC15.96■□□□□ 0.15
PPP4R4Q6NUP7 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC15.96■□□□□ 0.15
PPP4R4Q6NUP7 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms