Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC19.94■□□□□ 0.78
RFX7Q2KHR2 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RFX7Q2KHR2 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC19.94■□□□□ 0.78
RFX7Q2KHR2 AC107890.1-201ENST00000422478 521 ntBASIC19.94■□□□□ 0.78
RFX7Q2KHR2 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC19.94■□□□□ 0.78
RFX7Q2KHR2 AC055876.3-201ENST00000431496 288 ntBASIC19.94■□□□□ 0.78
RFX7Q2KHR2 PPP6R2P1-201ENST00000450880 1275 ntBASIC19.94■□□□□ 0.78
RFX7Q2KHR2 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC19.94■□□□□ 0.78
RFX7Q2KHR2 AC093214.1-201ENST00000511688 1107 ntBASIC19.94■□□□□ 0.78
RFX7Q2KHR2 IGHV3-62-201ENST00000520057 340 ntBASIC19.94■□□□□ 0.78
RFX7Q2KHR2 ALG1L8P-201ENST00000533887 760 ntBASIC19.94■□□□□ 0.78
RFX7Q2KHR2 AC140878.1-201ENST00000565277 250 ntBASIC19.94■□□□□ 0.78
RFX7Q2KHR2 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC19.94■□□□□ 0.78
RFX7Q2KHR2 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC19.94■□□□□ 0.78
RFX7Q2KHR2 AC138649.4-201ENST00000612222 287 ntBASIC19.94■□□□□ 0.78
RFX7Q2KHR2 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RFX7Q2KHR2 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
RFX7Q2KHR2 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC19.94■□□□□ 0.78
RFX7Q2KHR2 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC19.94■□□□□ 0.78
RFX7Q2KHR2 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC19.93■□□□□ 0.78
RFX7Q2KHR2 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
RFX7Q2KHR2 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RFX7Q2KHR2 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RFX7Q2KHR2 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RFX7Q2KHR2 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
RFX7Q2KHR2 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC19.93■□□□□ 0.78
RFX7Q2KHR2 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RFX7Q2KHR2 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RFX7Q2KHR2 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC19.93■□□□□ 0.78
RFX7Q2KHR2 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
RFX7Q2KHR2 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC19.93■□□□□ 0.78
RFX7Q2KHR2 CYP2T1P-202ENST00000641596 2535 ntBASIC19.93■□□□□ 0.78
RFX7Q2KHR2 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RFX7Q2KHR2 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC19.93■□□□□ 0.78
RFX7Q2KHR2 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC19.93■□□□□ 0.78
RFX7Q2KHR2 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RFX7Q2KHR2 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC19.93■□□□□ 0.78
RFX7Q2KHR2 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RFX7Q2KHR2 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC19.93■□□□□ 0.78
RFX7Q2KHR2 GREM1-201ENST00000560677 623 ntTSL 4 BASIC19.93■□□□□ 0.78
RFX7Q2KHR2 AC073389.1-201ENST00000595595 795 ntBASIC19.93■□□□□ 0.78
RFX7Q2KHR2 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RFX7Q2KHR2 NKG7-205ENST00000600427 520 ntTSL 3 BASIC19.93■□□□□ 0.78
RFX7Q2KHR2 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
RFX7Q2KHR2 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RFX7Q2KHR2 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
RFX7Q2KHR2 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RFX7Q2KHR2 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RFX7Q2KHR2 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RFX7Q2KHR2 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RFX7Q2KHR2 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
RFX7Q2KHR2 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC19.92■□□□□ 0.78
RFX7Q2KHR2 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RFX7Q2KHR2 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RFX7Q2KHR2 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RFX7Q2KHR2 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RFX7Q2KHR2 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC19.92■□□□□ 0.78
RFX7Q2KHR2 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC19.92■□□□□ 0.78
RFX7Q2KHR2 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RFX7Q2KHR2 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
RFX7Q2KHR2 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC19.92■□□□□ 0.78
RFX7Q2KHR2 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RFX7Q2KHR2 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RFX7Q2KHR2 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RFX7Q2KHR2 BAD-202ENST00000394531 631 ntTSL 3 BASIC19.92■□□□□ 0.78
RFX7Q2KHR2 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC19.92■□□□□ 0.78
RFX7Q2KHR2 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC19.92■□□□□ 0.78
RFX7Q2KHR2 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
RFX7Q2KHR2 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
RFX7Q2KHR2 BAD-207ENST00000544785 525 ntTSL 3 BASIC19.92■□□□□ 0.78
RFX7Q2KHR2 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RFX7Q2KHR2 AL138918.1-201ENST00000568306 659 ntBASIC19.92■□□□□ 0.78
RFX7Q2KHR2 NAA60-208ENST00000570819 833 ntTSL 2 BASIC19.92■□□□□ 0.78
RFX7Q2KHR2 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC19.92■□□□□ 0.78
RFX7Q2KHR2 AL158211.3-201ENST00000607385 239 ntBASIC19.92■□□□□ 0.78
RFX7Q2KHR2 MIR6080-201ENST00000617359 66 ntBASIC19.92■□□□□ 0.78
RFX7Q2KHR2 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC19.92■□□□□ 0.78
RFX7Q2KHR2 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC19.92■□□□□ 0.78
RFX7Q2KHR2 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RFX7Q2KHR2 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RFX7Q2KHR2 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RFX7Q2KHR2 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RFX7Q2KHR2 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC19.91■□□□□ 0.78
RFX7Q2KHR2 FO538757.1-201ENST00000623083 1397 ntBASIC19.91■□□□□ 0.78
RFX7Q2KHR2 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC19.91■□□□□ 0.78
RFX7Q2KHR2 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
RFX7Q2KHR2 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RFX7Q2KHR2 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
RFX7Q2KHR2 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RFX7Q2KHR2 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RFX7Q2KHR2 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC19.91■□□□□ 0.78
RFX7Q2KHR2 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC19.91■□□□□ 0.78
RFX7Q2KHR2 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RFX7Q2KHR2 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC19.91■□□□□ 0.78
RFX7Q2KHR2 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC19.91■□□□□ 0.78
RFX7Q2KHR2 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RFX7Q2KHR2 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RFX7Q2KHR2 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC19.91■□□□□ 0.78
RFX7Q2KHR2 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC19.91■□□□□ 0.78
RFX7Q2KHR2 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms