Protein–RNA interactions for Protein: Q08554

DSC1, Desmocollin-1, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DSC1Q08554 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC17.48■□□□□ 0.39
DSC1Q08554 RN7SL618P-201ENST00000477850 296 ntBASIC17.48■□□□□ 0.39
DSC1Q08554 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC17.48■□□□□ 0.39
DSC1Q08554 AC027307.3-201ENST00000594262 1100 ntBASIC17.48■□□□□ 0.39
DSC1Q08554 RNA5-8SN1-201ENST00000610460 153 ntBASIC17.48■□□□□ 0.39
DSC1Q08554 RNA5-8SN5-202ENST00000612463 153 ntBASIC17.48■□□□□ 0.39
DSC1Q08554 RNA5-8SN4-201ENST00000613359 153 ntBASIC17.48■□□□□ 0.39
DSC1Q08554 RNA5-8SN5-201ENST00000619471 153 ntBASIC17.48■□□□□ 0.39
DSC1Q08554 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
DSC1Q08554 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
DSC1Q08554 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC17.48■□□□□ 0.39
DSC1Q08554 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC17.48■□□□□ 0.39
DSC1Q08554 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
DSC1Q08554 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
DSC1Q08554 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC17.47■□□□□ 0.39
DSC1Q08554 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
DSC1Q08554 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC17.47■□□□□ 0.39
DSC1Q08554 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC17.47■□□□□ 0.39
DSC1Q08554 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC17.47■□□□□ 0.39
DSC1Q08554 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
DSC1Q08554 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.47■□□□□ 0.39
DSC1Q08554 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
DSC1Q08554 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.47■□□□□ 0.39
DSC1Q08554 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
DSC1Q08554 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
DSC1Q08554 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
DSC1Q08554 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
DSC1Q08554 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
DSC1Q08554 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
DSC1Q08554 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC17.47■□□□□ 0.39
DSC1Q08554 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
DSC1Q08554 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC17.47■□□□□ 0.39
DSC1Q08554 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC17.47■□□□□ 0.39
DSC1Q08554 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
DSC1Q08554 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
DSC1Q08554 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC17.47■□□□□ 0.39
DSC1Q08554 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.47■□□□□ 0.39
DSC1Q08554 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC17.47■□□□□ 0.39
DSC1Q08554 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
DSC1Q08554 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.47■□□□□ 0.39
DSC1Q08554 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
DSC1Q08554 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC17.47■□□□□ 0.39
DSC1Q08554 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC17.47■□□□□ 0.39
DSC1Q08554 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
DSC1Q08554 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
DSC1Q08554 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
DSC1Q08554 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
DSC1Q08554 GCK-202ENST00000345378 2421 ntTSL 2 BASIC17.47■□□□□ 0.39
DSC1Q08554 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17.47■□□□□ 0.39
DSC1Q08554 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
DSC1Q08554 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
DSC1Q08554 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
DSC1Q08554 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.46■□□□□ 0.39
DSC1Q08554 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
DSC1Q08554 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
DSC1Q08554 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
DSC1Q08554 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
DSC1Q08554 RNF216P1-203ENST00000404404 2427 ntBASIC17.46■□□□□ 0.39
DSC1Q08554 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC17.46■□□□□ 0.39
DSC1Q08554 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
DSC1Q08554 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
DSC1Q08554 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
DSC1Q08554 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
DSC1Q08554 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
DSC1Q08554 EDF1-203ENST00000371649 790 ntTSL 2 BASIC17.46■□□□□ 0.39
DSC1Q08554 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC17.46■□□□□ 0.39
DSC1Q08554 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
DSC1Q08554 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
DSC1Q08554 AC135586.1-201ENST00000539323 574 ntBASIC17.46■□□□□ 0.39
DSC1Q08554 AL596325.1-201ENST00000563991 1082 ntBASIC17.46■□□□□ 0.39
DSC1Q08554 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC17.46■□□□□ 0.39
DSC1Q08554 AL358472.5-202ENST00000641448 1267 ntBASIC17.46■□□□□ 0.39
DSC1Q08554 AC138932.1-201ENST00000534164 6830 ntBASIC17.46■□□□□ 0.39
DSC1Q08554 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
DSC1Q08554 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.46■□□□□ 0.39
DSC1Q08554 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
DSC1Q08554 AC005622.1-201ENST00000636801 1703 ntBASIC17.46■□□□□ 0.39
DSC1Q08554 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
DSC1Q08554 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
DSC1Q08554 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.46■□□□□ 0.39
DSC1Q08554 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
DSC1Q08554 IMPDH1P4-201ENST00000445028 1534 ntBASIC17.46■□□□□ 0.39
DSC1Q08554 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
DSC1Q08554 HLA-A-202ENST00000376806 1854 ntBASIC17.46■□□□□ 0.38
DSC1Q08554 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
DSC1Q08554 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
DSC1Q08554 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
DSC1Q08554 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
DSC1Q08554 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC17.45■□□□□ 0.38
DSC1Q08554 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
DSC1Q08554 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC17.45■□□□□ 0.38
DSC1Q08554 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
DSC1Q08554 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
DSC1Q08554 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
DSC1Q08554 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
DSC1Q08554 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC17.45■□□□□ 0.38
DSC1Q08554 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC17.45■□□□□ 0.38
DSC1Q08554 SERBP1P3-201ENST00000459980 809 ntBASIC17.45■□□□□ 0.38
DSC1Q08554 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC17.45■□□□□ 0.38
DSC1Q08554 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms