Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 AC008894.3-201ENST00000624324 3103 ntBASIC15.72■□□□□ 0.11
RAE1P78406 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC15.72■□□□□ 0.11
RAE1P78406 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAE1P78406 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAE1P78406 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAE1P78406 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAE1P78406 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC15.72■□□□□ 0.11
RAE1P78406 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
RAE1P78406 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RAE1P78406 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
RAE1P78406 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RAE1P78406 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
RAE1P78406 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC15.71■□□□□ 0.11
RAE1P78406 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RAE1P78406 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RAE1P78406 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC15.71■□□□□ 0.11
RAE1P78406 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RAE1P78406 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RAE1P78406 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC15.71■□□□□ 0.11
RAE1P78406 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC15.71■□□□□ 0.11
RAE1P78406 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RAE1P78406 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RAE1P78406 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RAE1P78406 PGR-209ENST00000617858 2816 ntTSL 5 BASIC15.71■□□□□ 0.11
RAE1P78406 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC15.71■□□□□ 0.11
RAE1P78406 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
RAE1P78406 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RAE1P78406 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
RAE1P78406 FALEC-201ENST00000416894 566 ntTSL 3 BASIC15.71■□□□□ 0.11
RAE1P78406 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC15.71■□□□□ 0.11
RAE1P78406 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC15.71■□□□□ 0.11
RAE1P78406 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC15.71■□□□□ 0.11
RAE1P78406 KRT18P2-201ENST00000447938 1258 ntBASIC15.71■□□□□ 0.11
RAE1P78406 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC15.71■□□□□ 0.11
RAE1P78406 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RAE1P78406 RPL18-209ENST00000550645 463 ntTSL 5 BASIC15.71■□□□□ 0.11
RAE1P78406 RPL18-214ENST00000552588 559 ntTSL 3 BASIC15.71■□□□□ 0.11
RAE1P78406 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC15.71■□□□□ 0.11
RAE1P78406 AL121894.2-201ENST00000602977 491 ntBASIC15.71■□□□□ 0.11
RAE1P78406 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
RAE1P78406 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC15.71■□□□□ 0.11
RAE1P78406 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC15.71■□□□□ 0.11
RAE1P78406 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RAE1P78406 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC15.71■□□□□ 0.11
RAE1P78406 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
RAE1P78406 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC15.71■□□□□ 0.11
RAE1P78406 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RAE1P78406 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RAE1P78406 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC15.71■□□□□ 0.11
RAE1P78406 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
RAE1P78406 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RAE1P78406 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
RAE1P78406 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
RAE1P78406 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
RAE1P78406 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
RAE1P78406 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC15.71■□□□□ 0.1
RAE1P78406 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
RAE1P78406 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC15.71■□□□□ 0.1
RAE1P78406 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
RAE1P78406 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC15.7■□□□□ 0.1
RAE1P78406 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAE1P78406 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAE1P78406 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
RAE1P78406 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAE1P78406 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAE1P78406 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC15.7■□□□□ 0.1
RAE1P78406 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAE1P78406 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RAE1P78406 AL592424.1-201ENST00000563624 1536 ntBASIC15.7■□□□□ 0.1
RAE1P78406 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAE1P78406 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAE1P78406 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAE1P78406 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RAE1P78406 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC15.7■□□□□ 0.1
RAE1P78406 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC15.7■□□□□ 0.1
RAE1P78406 CRCP-205ENST00000431089 942 ntTSL 2 BASIC15.7■□□□□ 0.1
RAE1P78406 FDX1P1-201ENST00000449115 551 ntBASIC15.7■□□□□ 0.1
RAE1P78406 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC15.7■□□□□ 0.1
RAE1P78406 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC15.7■□□□□ 0.1
RAE1P78406 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC15.7■□□□□ 0.1
RAE1P78406 THTPA-204ENST00000554970 569 ntTSL 4 BASIC15.7■□□□□ 0.1
RAE1P78406 THTPA-206ENST00000556015 535 ntTSL 3 BASIC15.7■□□□□ 0.1
RAE1P78406 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC15.7■□□□□ 0.1
RAE1P78406 AC018845.2-201ENST00000568326 409 ntBASIC15.7■□□□□ 0.1
RAE1P78406 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
RAE1P78406 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC15.7■□□□□ 0.1
RAE1P78406 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC15.7■□□□□ 0.1
RAE1P78406 AL009183.1-201ENST00000603760 355 ntBASIC15.7■□□□□ 0.1
RAE1P78406 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC15.7■□□□□ 0.1
RAE1P78406 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RAE1P78406 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAE1P78406 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAE1P78406 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
RAE1P78406 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
RAE1P78406 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
RAE1P78406 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAE1P78406 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAE1P78406 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC15.7■□□□□ 0.1
RAE1P78406 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAE1P78406 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms